Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Rfx1P48377 Gm15151-201ENSMUST00000117106 177 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm13457-201ENSMUST00000117885 267 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm23759-201ENSMUST00000158351 268 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm22621-201ENSMUST00000179678 74 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm27402-201ENSMUST00000183890 120 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm2077-201ENSMUST00000195017 319 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm9238-201ENSMUST00000196181 329 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm7041-201ENSMUST00000201227 524 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm4714-201ENSMUST00000203395 279 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm45365-201ENSMUST00000209489 256 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Rfx1P48377 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm5265-201ENSMUST00000076828 342 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm23451-201ENSMUST00000083328 122 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Gm23845-201ENSMUST00000083834 152 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Rfx1P48377 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Rfx1P48377 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Rfx1P48377 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rfx1P48377 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Rfx1P48377 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Rfx1P48377 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rfx1P48377 Gm12982-201ENSMUST00000117408 190 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm11698-201ENSMUST00000117948 455 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm12647-201ENSMUST00000118977 265 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm6565-201ENSMUST00000121217 438 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm14581-201ENSMUST00000121726 198 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm26256-201ENSMUST00000122499 186 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm24481-201ENSMUST00000157210 102 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm23513-201ENSMUST00000158181 133 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.04□□□□□ -1.6
Rfx1P48377 Gm25121-201ENSMUST00000179846 79 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Rfx1P48377 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.04□□□□□ -1.6
Rfx1P48377 Gm7093-201ENSMUST00000223004 581 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm23626-201ENSMUST00000082458 133 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Gm6361-201ENSMUST00000091031 435 ntBASIC5.04□□□□□ -1.6
Rfx1P48377 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rfx1P48377 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Rfx1P48377 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm36960-201ENSMUST00000195491 2035 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Rfx1P48377 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm23142-201ENSMUST00000101848 105 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm26240-201ENSMUST00000101893 105 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Rfx1P48377 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm25565-201ENSMUST00000104605 105 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 n-R5s52-201ENSMUST00000104614 113 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm8200-201ENSMUST00000122390 222 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm23184-201ENSMUST00000122594 131 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm22277-201ENSMUST00000157204 277 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm20674-201ENSMUST00000177452 369 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm42990-201ENSMUST00000199231 312 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm44157-201ENSMUST00000204720 410 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Gm2607-201ENSMUST00000212389 627 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rfx1P48377 Snora23-201ENSMUST00000082517 184 ntBASIC5.03□□□□□ -1.6
Rfx1P48377 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Rfx1P48377 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Rfx1P48377 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.02□□□□□ -1.61
Rfx1P48377 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm24160-201ENSMUST00000104594 126 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm13880-201ENSMUST00000118421 474 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm15120-201ENSMUST00000120602 301 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm15905-201ENSMUST00000137042 298 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm25643-201ENSMUST00000158874 103 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm17187-201ENSMUST00000164622 410 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rfx1P48377 Gm43649-201ENSMUST00000196596 391 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm8940-201ENSMUST00000212585 219 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.02□□□□□ -1.61
Rfx1P48377 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm23464-201ENSMUST00000083145 147 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Gm650-201ENSMUST00000144428 1551 ntBASIC5.02□□□□□ -1.61
Rfx1P48377 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms