Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13355-201ENSMUST00000117996 317 ntBASIC1.38□□□□□ -2.19
HttP42859 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HttP42859 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.38□□□□□ -2.19
HttP42859 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HttP42859 Gm8219-201ENSMUST00000218309 242 ntBASIC1.38□□□□□ -2.19
HttP42859 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC1.37□□□□□ -2.19
HttP42859 Gm8125-201ENSMUST00000216602 738 ntBASIC1.37□□□□□ -2.19
HttP42859 Gm18964-201ENSMUST00000193013 563 ntBASIC1.37□□□□□ -2.19
HttP42859 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC1.37□□□□□ -2.19
HttP42859 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.37□□□□□ -2.19
HttP42859 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HttP42859 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
HttP42859 Gm3442-201ENSMUST00000216808 710 ntBASIC1.37□□□□□ -2.19
HttP42859 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HttP42859 Mir101a-201ENSMUST00000083517 83 ntBASIC1.37□□□□□ -2.19
HttP42859 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
HttP42859 Gm22802-201ENSMUST00000175621 89 ntBASIC1.36□□□□□ -2.19
HttP42859 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC1.36□□□□□ -2.19
HttP42859 Gm15157-201ENSMUST00000121852 702 ntBASIC1.36□□□□□ -2.19
HttP42859 Gm15530-201ENSMUST00000122206 555 ntBASIC1.36□□□□□ -2.19
HttP42859 Gm23020-201ENSMUST00000158766 253 ntBASIC1.36□□□□□ -2.19
HttP42859 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HttP42859 Gm29288-201ENSMUST00000191582 901 ntBASIC1.36□□□□□ -2.19
HttP42859 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HttP42859 Gm13331-201ENSMUST00000117500 448 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm15267-201ENSMUST00000120888 464 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm34701-202ENSMUST00000204685 360 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm18598-201ENSMUST00000207724 597 ntBASIC1.35□□□□□ -2.19
HttP42859 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
HttP42859 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm22048-201ENSMUST00000104721 89 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HttP42859 Gm26414-201ENSMUST00000157674 269 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm36994-201ENSMUST00000192941 492 ntBASIC1.35□□□□□ -2.19
HttP42859 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.35□□□□□ -2.19
HttP42859 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.35□□□□□ -2.19
HttP42859 Gm25005-201ENSMUST00000083812 156 ntBASIC1.35□□□□□ -2.19
HttP42859 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.34□□□□□ -2.19
HttP42859 Gm24772-201ENSMUST00000158507 110 ntBASIC1.34□□□□□ -2.19
HttP42859 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.34□□□□□ -2.19
HttP42859 Mir5098-201ENSMUST00000175320 82 ntBASIC1.34□□□□□ -2.19
HttP42859 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HttP42859 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HttP42859 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HttP42859 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HttP42859 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.34□□□□□ -2.2
HttP42859 Gm11862-201ENSMUST00000119678 659 ntBASIC1.34□□□□□ -2.2
HttP42859 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
HttP42859 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.34□□□□□ -2.2
HttP42859 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HttP42859 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.34□□□□□ -2.2
HttP42859 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HttP42859 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
HttP42859 Gm12587-201ENSMUST00000120180 427 ntBASIC1.33□□□□□ -2.2
HttP42859 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HttP42859 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.33□□□□□ -2.2
HttP42859 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.33□□□□□ -2.2
HttP42859 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HttP42859 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.33□□□□□ -2.2
HttP42859 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.33□□□□□ -2.2
HttP42859 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC1.33□□□□□ -2.2
HttP42859 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.33□□□□□ -2.2
HttP42859 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
HttP42859 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.33□□□□□ -2.2
HttP42859 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HttP42859 Gm37899-201ENSMUST00000193116 8717 ntBASIC1.32□□□□□ -2.2
HttP42859 Gm24280-201ENSMUST00000104237 134 ntBASIC1.32□□□□□ -2.2
HttP42859 Gm15443-201ENSMUST00000118947 820 ntBASIC1.32□□□□□ -2.2
HttP42859 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HttP42859 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.32□□□□□ -2.2
HttP42859 Gm44634-201ENSMUST00000206119 152 ntBASIC1.32□□□□□ -2.2
HttP42859 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.32□□□□□ -2.2
HttP42859 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HttP42859 Gm12934-201ENSMUST00000119221 343 ntBASIC1.32□□□□□ -2.2
HttP42859 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.32□□□□□ -2.2
HttP42859 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC1.32□□□□□ -2.2
HttP42859 Gm28151-201ENSMUST00000189404 951 ntBASIC1.32□□□□□ -2.2
HttP42859 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.32□□□□□ -2.2
HttP42859 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.32□□□□□ -2.2
HttP42859 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HttP42859 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HttP42859 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
HttP42859 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HttP42859 Gm15106-201ENSMUST00000119691 821 ntBASIC1.31□□□□□ -2.2
HttP42859 Gm25555-201ENSMUST00000158078 111 ntBASIC1.31□□□□□ -2.2
HttP42859 Gm26435-201ENSMUST00000179026 107 ntBASIC1.31□□□□□ -2.2
HttP42859 Gm45445-201ENSMUST00000209586 232 ntBASIC1.31□□□□□ -2.2
HttP42859 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HttP42859 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Gm26207-201ENSMUST00000082909 104 ntBASIC1.31□□□□□ -2.2
HttP42859 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Gm42448-201ENSMUST00000197122 2644 ntBASIC1.31□□□□□ -2.2
HttP42859 BC051076-202ENSMUST00000199477 2868 ntBASIC1.31□□□□□ -2.2
HttP42859 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HttP42859 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Gm24768-201ENSMUST00000158512 94 ntBASIC1.31□□□□□ -2.2
HttP42859 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.31□□□□□ -2.2
HttP42859 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms