Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm22639-201ENSMUST00000175591 125 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm24979-201ENSMUST00000178626 126 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm27245-201ENSMUST00000184385 376 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Mir6371-201ENSMUST00000184470 111 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm27743-201ENSMUST00000185136 126 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm29429-201ENSMUST00000187071 121 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm9696-202ENSMUST00000191541 830 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm37575-201ENSMUST00000195467 309 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm44910-201ENSMUST00000208451 396 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hoxc11P31313 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm26446-201ENSMUST00000082455 103 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm25856-201ENSMUST00000082786 75 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm23093-201ENSMUST00000083450 102 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm25630-201ENSMUST00000084000 162 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 Gm10343-201ENSMUST00000096279 348 ntBASIC3.42□□□□□ -1.86
Hoxc11P31313 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Hoxc11P31313 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxc11P31313 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxc11P31313 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm26275-201ENSMUST00000157101 268 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm23716-201ENSMUST00000157348 144 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm24059-201ENSMUST00000157493 312 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm9071-201ENSMUST00000165915 474 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxc11P31313 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm28399-201ENSMUST00000186221 318 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm28572-201ENSMUST00000187444 318 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm19193-201ENSMUST00000190263 590 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm28314-201ENSMUST00000191276 345 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm5829-201ENSMUST00000191383 351 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm28927-201ENSMUST00000191528 272 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm32381-201ENSMUST00000203192 476 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm9712-201ENSMUST00000210842 311 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm19563-201ENSMUST00000222031 270 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxc11P31313 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm22739-201ENSMUST00000083437 160 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Gm381-201ENSMUST00000117443 2037 ntBASIC3.41□□□□□ -1.86
Hoxc11P31313 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hoxc11P31313 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hoxc11P31313 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm22115-201ENSMUST00000103976 133 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm23923-201ENSMUST00000104108 133 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm24889-201ENSMUST00000104388 132 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm14622-201ENSMUST00000117117 468 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm13085-201ENSMUST00000118356 171 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm24720-201ENSMUST00000157518 166 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm22098-201ENSMUST00000157930 85 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm6374-201ENSMUST00000159051 788 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm24518-201ENSMUST00000180275 94 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm37104-201ENSMUST00000193278 196 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm8747-201ENSMUST00000195392 751 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm37029-201ENSMUST00000195773 239 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm44142-201ENSMUST00000203358 311 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm35857-201ENSMUST00000212739 178 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Hoxc11P31313 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.4□□□□□ -1.87
Hoxc11P31313 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Hoxc11P31313 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Hoxc11P31313 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxc11P31313 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Hoxc11P31313 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms