Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RaraP11416 Gm23014-201ENSMUST00000104144 130 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm16032-201ENSMUST00000118534 168 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm13273-201ENSMUST00000119737 159 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm11718-201ENSMUST00000119942 537 ntBASIC4.73□□□□□ -1.65
RaraP11416 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.73□□□□□ -1.65
RaraP11416 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm6265-201ENSMUST00000149263 231 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm23743-201ENSMUST00000157389 274 ntBASIC4.73□□□□□ -1.65
RaraP11416 Mir3104-201ENSMUST00000174911 63 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm23638-201ENSMUST00000175073 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm23158-201ENSMUST00000175076 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm22907-201ENSMUST00000175198 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm22625-201ENSMUST00000175382 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm22875-201ENSMUST00000175449 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm25197-201ENSMUST00000175516 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm27857-201ENSMUST00000176930 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm26268-201ENSMUST00000177685 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm23681-201ENSMUST00000178821 126 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Gm29218-205ENSMUST00000190846 615 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm37089-201ENSMUST00000195616 129 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm43250-201ENSMUST00000196536 273 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.73□□□□□ -1.65
RaraP11416 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.73□□□□□ -1.65
RaraP11416 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.73□□□□□ -1.65
RaraP11416 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.73□□□□□ -1.65
RaraP11416 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
RaraP11416 Gm44960-201ENSMUST00000207403 141 ntBASIC4.73□□□□□ -1.65
RaraP11416 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.73□□□□□ -1.65
RaraP11416 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.73□□□□□ -1.65
RaraP11416 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.73□□□□□ -1.65
RaraP11416 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RaraP11416 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.72□□□□□ -1.65
RaraP11416 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RaraP11416 Gm24423-201ENSMUST00000101982 106 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm15029-201ENSMUST00000119742 199 ntBASIC4.72□□□□□ -1.65
RaraP11416 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.72□□□□□ -1.65
RaraP11416 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.72□□□□□ -1.65
RaraP11416 Gm25283-201ENSMUST00000157272 77 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.72□□□□□ -1.65
RaraP11416 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.72□□□□□ -1.65
RaraP11416 Mir7056-201ENSMUST00000183776 59 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm18956-201ENSMUST00000192857 480 ntBASIC4.72□□□□□ -1.65
RaraP11416 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RaraP11416 Gm43028-201ENSMUST00000202561 481 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm45499-201ENSMUST00000211656 280 ntBASIC4.72□□□□□ -1.65
RaraP11416 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.72□□□□□ -1.65
RaraP11416 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.72□□□□□ -1.65
RaraP11416 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.72□□□□□ -1.65
RaraP11416 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.71□□□□□ -1.65
RaraP11416 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RaraP11416 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.71□□□□□ -1.65
RaraP11416 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RaraP11416 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RaraP11416 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RaraP11416 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RaraP11416 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RaraP11416 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RaraP11416 Gm24117-201ENSMUST00000103973 133 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm15760-201ENSMUST00000119553 283 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm6574-201ENSMUST00000120037 362 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm26479-201ENSMUST00000122620 106 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm22337-201ENSMUST00000157721 132 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm2962-201ENSMUST00000159266 336 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm17187-201ENSMUST00000164622 410 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm3370-201ENSMUST00000171785 500 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm25450-201ENSMUST00000179144 107 ntBASIC4.71□□□□□ -1.66
RaraP11416 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RaraP11416 Gm27308-201ENSMUST00000184807 233 ntBASIC4.71□□□□□ -1.66
RaraP11416 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RaraP11416 Gm28976-201ENSMUST00000188070 144 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm9687-201ENSMUST00000189312 602 ntBASIC4.71□□□□□ -1.66
RaraP11416 Mir3535-201ENSMUST00000197651 147 ntBASIC4.71□□□□□ -1.66
RaraP11416 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.71□□□□□ -1.66
RaraP11416 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RaraP11416 Gm19366-201ENSMUST00000206996 156 ntBASIC4.71□□□□□ -1.66
RaraP11416 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RaraP11416 Mir471-201ENSMUST00000093596 67 ntBASIC4.71□□□□□ -1.66
RaraP11416 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RaraP11416 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.7□□□□□ -1.66
RaraP11416 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RaraP11416 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.7□□□□□ -1.66
RaraP11416 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.7□□□□□ -1.66
RaraP11416 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
RaraP11416 Gm25915-201ENSMUST00000104265 126 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm11432-201ENSMUST00000117334 231 ntBASIC4.7□□□□□ -1.66
RaraP11416 Gm14714-201ENSMUST00000119743 439 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms