Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28785-201ENSMUST00000187478 379 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Trbv6-201ENSMUST00000193743 276 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Mir703-201ENSMUST00000197105 109 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Gm43227-201ENSMUST00000202239 677 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Gm43930-201ENSMUST00000203868 845 ntBASIC2.99□□□□□ -1.93
Lire1P11260 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.99□□□□□ -1.93
Lire1P11260 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.99□□□□□ -1.93
Lire1P11260 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.99□□□□□ -1.93
Lire1P11260 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lire1P11260 Gm650-201ENSMUST00000144428 1551 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.99□□□□□ -1.93
Lire1P11260 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lire1P11260 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm15846-201ENSMUST00000116022 320 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm24546-201ENSMUST00000158652 102 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm20794-201ENSMUST00000177626 628 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm25194-201ENSMUST00000177987 79 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm28637-201ENSMUST00000179424 345 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm24264-201ENSMUST00000179835 94 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm28356-202ENSMUST00000187566 858 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm20885-201ENSMUST00000190192 654 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm33571-201ENSMUST00000193271 657 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm36866-201ENSMUST00000193343 657 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm36047-201ENSMUST00000193659 657 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm20857-201ENSMUST00000194766 657 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm20858-201ENSMUST00000195459 657 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm44324-201ENSMUST00000198517 135 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm35570-201ENSMUST00000198730 681 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 Gm46146-201ENSMUST00000217483 346 ntBASIC2.98□□□□□ -1.93
Lire1P11260 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.98□□□□□ -1.93
Lire1P11260 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.98□□□□□ -1.93
Lire1P11260 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm5471-201ENSMUST00000072732 337 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm22061-201ENSMUST00000082557 107 ntBASIC2.98□□□□□ -1.93
Lire1P11260 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.98□□□□□ -1.93
Lire1P11260 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.98□□□□□ -1.93
Lire1P11260 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Mir466n-201ENSMUST00000104798 94 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm14982-201ENSMUST00000121102 442 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm16412-201ENSMUST00000121602 273 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm25321-201ENSMUST00000122558 102 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm14389-201ENSMUST00000140453 241 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.97□□□□□ -1.93
Lire1P11260 Gm23671-201ENSMUST00000157472 103 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm10177-202ENSMUST00000161698 207 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm24304-201ENSMUST00000177635 107 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm22910-201ENSMUST00000178568 132 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.97□□□□□ -1.93
Lire1P11260 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.97□□□□□ -1.93
Lire1P11260 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Lire1P11260 Gm37866-201ENSMUST00000191950 696 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.97□□□□□ -1.93
Lire1P11260 Gm44125-201ENSMUST00000203068 448 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm44964-201ENSMUST00000207011 273 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Lire1P11260 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Gm7984-201ENSMUST00000060640 538 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Lire1P11260 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.97□□□□□ -1.93
Lire1P11260 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Lire1P11260 Gm25407-201ENSMUST00000104102 134 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Gm8880-201ENSMUST00000121800 454 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.96□□□□□ -1.94
Lire1P11260 Gm18520-201ENSMUST00000174783 658 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Gm26988-201ENSMUST00000183296 945 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Mir6353-201ENSMUST00000183596 113 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Lire1P11260 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.96□□□□□ -1.94
Lire1P11260 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.96□□□□□ -1.94
Lire1P11260 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.96□□□□□ -1.94
Lire1P11260 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.96□□□□□ -1.94
Lire1P11260 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.96□□□□□ -1.94
Lire1P11260 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Lire1P11260 Gm9845-201ENSMUST00000056409 598 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Lire1P11260 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Lire1P11260 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Lire1P11260 Gm25257-201ENSMUST00000083907 110 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Mir465-201ENSMUST00000093563 74 ntBASIC2.96□□□□□ -1.94
Lire1P11260 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms