Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm44757-201ENSMUST00000206373 157 ntBASIC3.79□□□□□ -1.8
Hoxd4P10628 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.79□□□□□ -1.8
Hoxd4P10628 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.79□□□□□ -1.8
Hoxd4P10628 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.79□□□□□ -1.8
Hoxd4P10628 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.79□□□□□ -1.8
Hoxd4P10628 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hoxd4P10628 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd4P10628 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd4P10628 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd4P10628 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd4P10628 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hoxd4P10628 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm11576-201ENSMUST00000117433 417 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm14971-201ENSMUST00000117980 663 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm5937-201ENSMUST00000119715 643 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm25783-201ENSMUST00000122525 190 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm24113-201ENSMUST00000157477 276 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm26022-201ENSMUST00000158663 108 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm26828-201ENSMUST00000180640 172 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm8242-202ENSMUST00000193056 475 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm43749-201ENSMUST00000199345 352 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm45380-201ENSMUST00000210465 315 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm29884-201ENSMUST00000218403 453 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.78□□□□□ -1.8
Hoxd4P10628 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.78□□□□□ -1.8
Hoxd4P10628 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Hoxd4P10628 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
Hoxd4P10628 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd4P10628 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm23422-201ENSMUST00000102000 107 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm12417-201ENSMUST00000119153 403 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm12156-201ENSMUST00000119188 554 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm6574-201ENSMUST00000120037 362 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm6969-201ENSMUST00000140065 342 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm24060-201ENSMUST00000157494 95 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm26085-201ENSMUST00000157900 116 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm26034-201ENSMUST00000158154 116 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.77□□□□□ -1.81
Hoxd4P10628 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm28288-201ENSMUST00000191019 214 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm6112-201ENSMUST00000208037 629 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm5358-201ENSMUST00000212814 353 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Hoxd4P10628 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd4P10628 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd4P10628 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd4P10628 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.77□□□□□ -1.81
Hoxd4P10628 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Hoxd4P10628 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.76□□□□□ -1.81
Hoxd4P10628 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Hoxd4P10628 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd4P10628 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd4P10628 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd4P10628 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd4P10628 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd4P10628 Mir92b-201ENSMUST00000102300 83 ntBASIC3.76□□□□□ -1.81
Hoxd4P10628 Gm24124-201ENSMUST00000104103 132 ntBASIC3.76□□□□□ -1.81
Hoxd4P10628 Gm11490-201ENSMUST00000118128 272 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms