Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25017-201ENSMUST00000179805 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm23618-201ENSMUST00000179912 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm26284-201ENSMUST00000180107 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24570-201ENSMUST00000180314 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24654-201ENSMUST00000180315 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm26983-201ENSMUST00000182051 388 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm28976-201ENSMUST00000188070 144 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm29308-201ENSMUST00000188863 315 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm28537-201ENSMUST00000189026 315 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm29631-201ENSMUST00000191065 315 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm37682-201ENSMUST00000191776 522 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm5285-201ENSMUST00000193089 666 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm17951-201ENSMUST00000198536 496 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm44030-201ENSMUST00000204865 432 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm8274-201ENSMUST00000219820 463 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Mir30b-201ENSMUST00000083542 96 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24449-201ENSMUST00000083985 106 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm9577-201ENSMUST00000174655 2620 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hoxd3P09027 Neat1-201ENSMUST00000173672 20771 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm3267-201ENSMUST00000118671 473 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm22883-201ENSMUST00000157376 106 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm26403-201ENSMUST00000158500 105 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm23799-201ENSMUST00000175559 120 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm29428-201ENSMUST00000190086 409 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm37361-201ENSMUST00000194345 132 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.98□□□□□ -1.77
Hoxd3P09027 AC153553.1-201ENSMUST00000218257 684 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.98□□□□□ -1.77
Hoxd3P09027 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 AC131178.1-201ENSMUST00000228649 492 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm8508-201ENSMUST00000061226 363 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm22247-201ENSMUST00000082476 131 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm25260-201ENSMUST00000083053 134 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Snora2b-201ENSMUST00000084005 137 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Mir199a-2-201ENSMUST00000093618 110 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hoxd3P09027 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm6503-201ENSMUST00000210829 2225 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Gm38253-201ENSMUST00000194058 4678 ntBASIC3.98□□□□□ -1.77
Hoxd3P09027 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
Hoxd3P09027 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm44027-201ENSMUST00000203419 3480 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Mir669b-201ENSMUST00000102172 97 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm13432-201ENSMUST00000118861 241 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm16345-201ENSMUST00000146065 158 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm24726-201ENSMUST00000158232 121 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm22476-201ENSMUST00000158902 100 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm27220-201ENSMUST00000183453 262 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm27551-201ENSMUST00000184258 77 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm28848-201ENSMUST00000189984 168 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm42988-201ENSMUST00000198116 225 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm43424-201ENSMUST00000200484 253 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm18462-201ENSMUST00000208112 417 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm40810-201ENSMUST00000219149 253 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm24356-201ENSMUST00000082859 106 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Mir20a-201ENSMUST00000083508 107 ntBASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hoxd3P09027 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hoxd3P09027 Gm37779-201ENSMUST00000194221 3380 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms