Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm24365-201ENSMUST00000175384 125 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm44310-201ENSMUST00000175424 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm22639-201ENSMUST00000175591 125 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm20794-201ENSMUST00000177626 628 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm24979-201ENSMUST00000178626 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm27743-201ENSMUST00000185136 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm38050-201ENSMUST00000191904 238 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm9379-201ENSMUST00000196790 646 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm18971-201ENSMUST00000197240 374 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cbx4O55187 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm24147-201ENSMUST00000082763 144 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm25630-201ENSMUST00000084000 162 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cbx4O55187 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cbx4O55187 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cbx4O55187 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm22656-201ENSMUST00000104199 171 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm24403-201ENSMUST00000104616 130 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm6071-201ENSMUST00000119561 440 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm14736-201ENSMUST00000121470 336 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm13368-201ENSMUST00000122443 430 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm25621-201ENSMUST00000157223 114 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm24419-201ENSMUST00000157875 332 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.34□□□□□ -1.87
Cbx4O55187 Gm28506-201ENSMUST00000189937 150 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm45673-201ENSMUST00000210293 358 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm7751-201ENSMUST00000212868 709 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm7240-201ENSMUST00000220769 664 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm26056-201ENSMUST00000083043 104 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm10242-201ENSMUST00000090064 330 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Gm23741-201ENSMUST00000097237 171 ntBASIC3.34□□□□□ -1.87
Cbx4O55187 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cbx4O55187 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.34□□□□□ -1.88
Cbx4O55187 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.34□□□□□ -1.88
Cbx4O55187 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm13046-201ENSMUST00000117391 501 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm15988-201ENSMUST00000118677 367 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm13692-201ENSMUST00000120774 371 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm8880-201ENSMUST00000121800 454 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm11229-201ENSMUST00000121993 437 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm22491-201ENSMUST00000157190 102 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm23671-201ENSMUST00000157472 103 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm24314-201ENSMUST00000158274 123 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm25748-201ENSMUST00000175487 70 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm23415-201ENSMUST00000175519 83 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm24418-201ENSMUST00000177597 79 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm24639-201ENSMUST00000178518 79 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm23076-201ENSMUST00000179082 79 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm25077-201ENSMUST00000179157 79 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.33□□□□□ -1.88
Cbx4O55187 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm28141-201ENSMUST00000186676 342 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Trbv24-201ENSMUST00000194614 347 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Gm43039-201ENSMUST00000202883 963 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.33□□□□□ -1.88
Cbx4O55187 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Cbx4O55187 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm22245-201ENSMUST00000082479 103 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Snord35b-201ENSMUST00000082833 87 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cbx4O55187 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.33□□□□□ -1.88
Cbx4O55187 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cbx4O55187 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm25272-201ENSMUST00000104293 128 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm14670-201ENSMUST00000117327 337 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm12386-201ENSMUST00000117380 688 ntBASIC3.32□□□□□ -1.88
Cbx4O55187 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.32□□□□□ -1.88
Cbx4O55187 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms