Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.68□□□□□ -2.14
Hmgb3O54879 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm24127-201ENSMUST00000104110 130 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm12313-201ENSMUST00000121347 421 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.67□□□□□ -2.14
Hmgb3O54879 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm22693-201ENSMUST00000175049 442 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm20698-201ENSMUST00000175657 233 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Mir6541-201ENSMUST00000183649 110 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm18985-201ENSMUST00000196472 1079 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm18341-201ENSMUST00000197538 622 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm43142-201ENSMUST00000198670 361 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm19147-201ENSMUST00000199622 652 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm44232-201ENSMUST00000204537 225 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm44472-201ENSMUST00000204922 943 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.67□□□□□ -2.14
Hmgb3O54879 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm22249-201ENSMUST00000082485 136 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Gm23247-201ENSMUST00000083373 107 ntBASIC1.67□□□□□ -2.14
Hmgb3O54879 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Hmgb3O54879 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm24049-201ENSMUST00000102409 100 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm15067-201ENSMUST00000119534 156 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm13751-201ENSMUST00000120280 752 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm26215-201ENSMUST00000158584 139 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm17161-201ENSMUST00000169187 524 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Mir3076-201ENSMUST00000175415 60 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm22131-201ENSMUST00000178415 94 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm29192-201ENSMUST00000190942 377 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm38075-201ENSMUST00000191979 920 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm17937-201ENSMUST00000197908 742 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm32222-201ENSMUST00000203296 298 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.66□□□□□ -2.14
Hmgb3O54879 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Gm25124-201ENSMUST00000083345 164 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.66□□□□□ -2.14
Hmgb3O54879 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Hmgb3O54879 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm15846-201ENSMUST00000116022 320 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm11935-201ENSMUST00000118608 399 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm8217-201ENSMUST00000119136 465 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm6071-201ENSMUST00000119561 440 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm24958-201ENSMUST00000158009 97 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Mir3965-201ENSMUST00000175570 69 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm18415-201ENSMUST00000177464 647 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm27761-201ENSMUST00000184091 131 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Hmgb3O54879 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm44720-201ENSMUST00000206076 260 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Gm18645-201ENSMUST00000209593 651 ntBASIC1.65□□□□□ -2.15
Hmgb3O54879 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Hmgb3O54879 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Hmgb3O54879 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm22270-201ENSMUST00000104034 132 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm15896-201ENSMUST00000118045 440 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm14821-201ENSMUST00000121975 435 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm26005-201ENSMUST00000158802 134 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm23402-201ENSMUST00000178130 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm24019-201ENSMUST00000178620 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm26243-201ENSMUST00000179260 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm42924-201ENSMUST00000197261 185 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.64□□□□□ -2.15
Hmgb3O54879 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Hmgb3O54879 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm23296-201ENSMUST00000082555 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm24859-201ENSMUST00000082729 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm24928-201ENSMUST00000083399 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm25897-201ENSMUST00000083709 107 ntBASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Hmgb3O54879 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.63□□□□□ -2.15
Hmgb3O54879 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms