Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm44655-201ENSMUST00000207768 423 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.89
Shisa8J3QNX5 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Mir690-201ENSMUST00000102110 109 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm26156-201ENSMUST00000116999 123 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm12255-201ENSMUST00000117184 284 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm2066-201ENSMUST00000118046 389 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm13717-201ENSMUST00000119868 365 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm11982-201ENSMUST00000121480 314 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm13419-201ENSMUST00000121711 271 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm11506-201ENSMUST00000122414 470 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm22059-201ENSMUST00000157544 104 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm26001-201ENSMUST00000157989 103 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm24577-201ENSMUST00000158580 63 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm27834-201ENSMUST00000183427 125 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm37603-201ENSMUST00000192368 219 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm37416-201ENSMUST00000193596 318 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm42665-201ENSMUST00000202100 586 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm7468-201ENSMUST00000203900 652 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm6240-201ENSMUST00000208014 473 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm44959-201ENSMUST00000209127 231 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm9309-201ENSMUST00000223537 546 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm25141-201ENSMUST00000083177 107 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm22577-201ENSMUST00000083731 109 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm26164-201ENSMUST00000083793 104 ntBASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shisa8J3QNX5 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm23577-201ENSMUST00000103950 110 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm15844-201ENSMUST00000118016 576 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm11556-201ENSMUST00000120751 288 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm14919-201ENSMUST00000120839 390 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm7327-201ENSMUST00000120925 652 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm14761-201ENSMUST00000121363 262 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm14694-201ENSMUST00000121856 282 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm13092-201ENSMUST00000136346 260 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm25967-201ENSMUST00000157168 147 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm23554-201ENSMUST00000157818 110 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm24534-201ENSMUST00000157949 291 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm22637-201ENSMUST00000158144 283 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Mir1251-201ENSMUST00000175486 84 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm24518-201ENSMUST00000180275 94 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm6651-201ENSMUST00000189471 271 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm20923-201ENSMUST00000190009 319 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm21088-201ENSMUST00000190875 316 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm30280-201ENSMUST00000192214 262 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm37001-201ENSMUST00000193377 190 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm45252-201ENSMUST00000211579 397 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm2829-201ENSMUST00000213121 499 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Olfr575-201ENSMUST00000084812 957 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.26□□□□□ -1.89
Shisa8J3QNX5 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Shisa8J3QNX5 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Shisa8J3QNX5 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms