Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm5258-201ENSMUST00000165437 327 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Mir5129-201ENSMUST00000174938 78 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm27624-201ENSMUST00000185047 177 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm43415-201ENSMUST00000201934 750 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm18540-201ENSMUST00000204025 526 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm45245-201ENSMUST00000210082 376 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm46138-201ENSMUST00000215294 426 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm17829-201ENSMUST00000219782 344 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Gm45815-201ENSMUST00000220241 146 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.04□□□□□ -1.6
NpcdF8VQB8 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NpcdF8VQB8 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NpcdF8VQB8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NpcdF8VQB8 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NpcdF8VQB8 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.04□□□□□ -1.6
NpcdF8VQB8 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm12982-201ENSMUST00000117408 190 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm14473-201ENSMUST00000122269 557 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Mir7578-201ENSMUST00000183455 82 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm28830-201ENSMUST00000188192 213 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm42451-201ENSMUST00000197410 244 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm7041-201ENSMUST00000201227 524 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm44208-201ENSMUST00000205199 421 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm8940-201ENSMUST00000212585 219 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm46389-201ENSMUST00000223199 392 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm18441-201ENSMUST00000223539 617 ntBASIC5.03□□□□□ -1.6
NpcdF8VQB8 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
NpcdF8VQB8 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NpcdF8VQB8 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm12276-201ENSMUST00000121709 301 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm26148-201ENSMUST00000157430 68 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm23666-201ENSMUST00000158053 116 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm7241-201ENSMUST00000159853 357 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm17109-201ENSMUST00000163985 358 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm17062-201ENSMUST00000166987 461 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm17162-201ENSMUST00000168538 473 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm27457-201ENSMUST00000184771 156 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm29097-201ENSMUST00000190273 422 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm37746-201ENSMUST00000193249 198 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm44076-201ENSMUST00000203072 520 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NpcdF8VQB8 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.02□□□□□ -1.61
NpcdF8VQB8 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.02□□□□□ -1.61
NpcdF8VQB8 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NpcdF8VQB8 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm23142-201ENSMUST00000101848 105 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm26240-201ENSMUST00000101893 105 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm8666-201ENSMUST00000117517 292 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm22314-201ENSMUST00000158007 281 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm22257-201ENSMUST00000158687 301 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm25362-201ENSMUST00000158854 105 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm27410-201ENSMUST00000183851 115 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm7837-201ENSMUST00000190873 412 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm29665-201ENSMUST00000191457 528 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm44349-201ENSMUST00000197048 123 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm44324-201ENSMUST00000198517 135 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm45365-201ENSMUST00000209489 256 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm45313-201ENSMUST00000210584 178 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm8274-201ENSMUST00000219820 463 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm23055-201ENSMUST00000082805 94 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.01□□□□□ -1.61
NpcdF8VQB8 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms