Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm18252-203ENSMUST00000215855 757 ntBASIC2.22□□□□□ -2.05
Scn1aA2APX8 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Scn1aA2APX8 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.22□□□□□ -2.05
Scn1aA2APX8 Gm5175-202ENSMUST00000219699 529 ntBASIC2.22□□□□□ -2.05
Scn1aA2APX8 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.22□□□□□ -2.05
Scn1aA2APX8 Gm9762-201ENSMUST00000036976 444 ntBASIC2.22□□□□□ -2.05
Scn1aA2APX8 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Scn1aA2APX8 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Mir344e-201ENSMUST00000104677 66 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm22072-201ENSMUST00000116850 121 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm5646-201ENSMUST00000120568 714 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm22073-201ENSMUST00000122668 189 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm23885-201ENSMUST00000122682 294 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm23548-201ENSMUST00000158963 106 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Mir7226-201ENSMUST00000184953 60 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm29553-201ENSMUST00000189692 279 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm37692-201ENSMUST00000192633 232 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm44266-201ENSMUST00000205235 500 ntBASIC2.21□□□□□ -2.06
Scn1aA2APX8 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Scn1aA2APX8 Gm26473-201ENSMUST00000116763 127 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm11460-201ENSMUST00000118200 361 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm6664-201ENSMUST00000119138 468 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm12383-201ENSMUST00000120628 760 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm14982-201ENSMUST00000121102 442 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm20648-201ENSMUST00000175815 328 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm27470-201ENSMUST00000184070 210 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm17929-201ENSMUST00000186851 627 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm23577-201ENSMUST00000103950 110 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm23950-201ENSMUST00000104026 129 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm13046-201ENSMUST00000117391 501 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm13574-201ENSMUST00000120482 394 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm24478-201ENSMUST00000157439 158 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm24237-201ENSMUST00000157790 132 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm22891-201ENSMUST00000158641 164 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm28802-201ENSMUST00000188624 944 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm24254-201ENSMUST00000083702 104 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.2□□□□□ -2.06
Scn1aA2APX8 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm15176-201ENSMUST00000117734 135 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm6923-201ENSMUST00000118343 406 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm28917-201ENSMUST00000187294 237 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm28766-201ENSMUST00000191086 234 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm37431-201ENSMUST00000195102 111 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm8747-201ENSMUST00000195392 751 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm42465-201ENSMUST00000197036 492 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm43004-201ENSMUST00000201872 703 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm46146-201ENSMUST00000217483 346 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm22578-201ENSMUST00000083730 107 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.19□□□□□ -2.06
Scn1aA2APX8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Scn1aA2APX8 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn1aA2APX8 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm22257-201ENSMUST00000158687 301 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm23473-201ENSMUST00000158883 116 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm16584-201ENSMUST00000159267 189 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm29658-201ENSMUST00000185404 230 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm37550-201ENSMUST00000193230 463 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Trbv18-201ENSMUST00000194256 294 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm43541-201ENSMUST00000197208 581 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.18□□□□□ -2.06
Scn1aA2APX8 Gm45687-201ENSMUST00000209454 155 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.18□□□□□ -2.06
Scn1aA2APX8 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms