Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm42665-201ENSMUST00000202100 586 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43026-201ENSMUST00000202972 325 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm32381-201ENSMUST00000203192 476 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 AC153924.1-201ENSMUST00000220117 312 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 AC102603.1-201ENSMUST00000227481 584 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8473-201ENSMUST00000176697 1885 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm22939-201ENSMUST00000103958 131 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm13510-201ENSMUST00000118659 429 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8217-201ENSMUST00000119136 465 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12825-201ENSMUST00000120249 563 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15272-201ENSMUST00000120865 233 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14506-201ENSMUST00000121165 536 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23168-201ENSMUST00000157156 143 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24082-201ENSMUST00000175175 83 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25360-201ENSMUST00000178786 191 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23648-201ENSMUST00000180301 107 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm28412-201ENSMUST00000187243 177 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37751-201ENSMUST00000192440 1198 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37743-201ENSMUST00000194645 376 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm44060-201ENSMUST00000204440 410 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm46136-201ENSMUST00000214730 565 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm2544-201ENSMUST00000222702 756 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 AC107757.3-201ENSMUST00000226312 535 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 AC144628.1-201ENSMUST00000227943 466 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm9762-201ENSMUST00000036976 444 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23506-201ENSMUST00000083077 107 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25764-201ENSMUST00000104092 134 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Snora36b-201ENSMUST00000104383 132 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm22151-201ENSMUST00000116963 58 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12156-201ENSMUST00000119188 554 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Mup-ps17-201ENSMUST00000120723 218 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25321-201ENSMUST00000122558 102 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24836-201ENSMUST00000122609 108 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm26105-201ENSMUST00000157253 190 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24190-201ENSMUST00000157976 216 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8207-201ENSMUST00000171204 502 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24264-201ENSMUST00000179835 94 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm38231-201ENSMUST00000192030 347 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43955-201ENSMUST00000204332 142 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm36776-201ENSMUST00000207006 203 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm18346-201ENSMUST00000216782 325 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 AC159242.1-201ENSMUST00000225832 194 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm5471-201ENSMUST00000072732 337 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm26458-201ENSMUST00000082832 128 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24948-201ENSMUST00000082866 207 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 AF357428-201ENSMUST00000083815 69 ntBASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav11A0A0B4J1J9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.84□□□□□ -2.12
Trav11A0A0B4J1J9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC1.84□□□□□ -2.12
Trav11A0A0B4J1J9 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.84□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav11A0A0B4J1J9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav11A0A0B4J1J9 Gm15094-201ENSMUST00000118394 1131 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms