Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26055-201ENSMUST00000083038 107 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm23506-201ENSMUST00000083077 107 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir423-201ENSMUST00000083584 109 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm38162-201ENSMUST00000195562 4597 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm12697-201ENSMUST00000118008 667 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm12819-201ENSMUST00000122223 629 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm14363-201ENSMUST00000122304 409 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm23600-201ENSMUST00000157260 71 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm22560-201ENSMUST00000157332 120 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26411-201ENSMUST00000157668 107 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm24959-201ENSMUST00000157924 146 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25373-201ENSMUST00000158156 115 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25194-201ENSMUST00000177987 79 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26189-201ENSMUST00000179879 107 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm28744-201ENSMUST00000189939 340 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm19066-201ENSMUST00000193232 1078 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm34314-201ENSMUST00000203622 367 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm44554-201ENSMUST00000208738 147 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 AC155923.1-201ENSMUST00000215676 356 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 AC154506.1-201ENSMUST00000225178 621 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 AC167977.2-201ENSMUST00000225676 682 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25199-201ENSMUST00000083095 104 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr895-201ENSMUST00000093864 951 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm42659-201ENSMUST00000196955 1754 ntBASIC2□□□□□ -2.09
Trbv1A0A0B4J1G7 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Mup-ps10-201ENSMUST00000119626 556 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm14240-201ENSMUST00000120353 546 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm15719-201ENSMUST00000120619 635 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm13502-201ENSMUST00000121574 684 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25283-201ENSMUST00000157272 77 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm22141-201ENSMUST00000157403 277 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm24291-201ENSMUST00000157633 162 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm3102-201ENSMUST00000164236 489 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm17187-201ENSMUST00000164622 410 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm3221-201ENSMUST00000164869 440 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm17166-201ENSMUST00000172006 431 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26195-201ENSMUST00000175035 101 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm27470-201ENSMUST00000184070 210 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir8106-201ENSMUST00000184520 139 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm37807-201ENSMUST00000194310 190 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm37037-201ENSMUST00000194475 424 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir7232-201ENSMUST00000197929 74 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir3069-201ENSMUST00000198802 65 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm43550-201ENSMUST00000200597 303 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm45395-201ENSMUST00000209891 559 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm46136-201ENSMUST00000214730 565 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm9973-202ENSMUST00000220926 166 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26002-201ENSMUST00000101915 107 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir466n-201ENSMUST00000104798 94 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir1193-201ENSMUST00000116761 121 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm14794-201ENSMUST00000118181 192 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm5646-201ENSMUST00000120568 714 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25637-201ENSMUST00000157529 107 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm17162-201ENSMUST00000168538 473 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25476-201ENSMUST00000175125 185 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Mir3965-201ENSMUST00000175570 69 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25874-201ENSMUST00000178030 79 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm18448-201ENSMUST00000186286 599 ntBASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm28917-201ENSMUST00000187294 237 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms