Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm44959-201ENSMUST00000209127 231 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Gm22577-201ENSMUST00000083731 109 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Gm10212-201ENSMUST00000087884 324 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Olfr713-201ENSMUST00000098139 975 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
H2afb3S4R1G7 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
H2afb3S4R1G7 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.4□□□□□ -1.86
H2afb3S4R1G7 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
H2afb3S4R1G7 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
H2afb3S4R1G7 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Mir743b-201ENSMUST00000104751 77 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm15151-201ENSMUST00000117106 177 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm11490-201ENSMUST00000118128 272 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm11862-201ENSMUST00000119678 659 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm25624-201ENSMUST00000157222 275 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm23123-201ENSMUST00000157648 144 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm25386-201ENSMUST00000157814 288 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm24727-201ENSMUST00000158231 144 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Mir1947-201ENSMUST00000158235 85 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm24577-201ENSMUST00000158580 63 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm24976-201ENSMUST00000158972 135 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm27875-201ENSMUST00000184425 123 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm28951-201ENSMUST00000190742 313 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm37416-201ENSMUST00000193596 318 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm8790-201ENSMUST00000194108 322 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm44354-201ENSMUST00000196017 143 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm44655-201ENSMUST00000207768 423 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm7407-201ENSMUST00000208301 568 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm45387-201ENSMUST00000209792 632 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Snora70-201ENSMUST00000083047 137 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.4□□□□□ -1.87
H2afb3S4R1G7 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb3S4R1G7 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm11577-201ENSMUST00000118030 737 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm13717-201ENSMUST00000119868 365 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm14768-201ENSMUST00000122126 678 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm22073-201ENSMUST00000122668 189 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm23213-201ENSMUST00000122715 313 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Mir5099-201ENSMUST00000175257 74 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm43155-201ENSMUST00000202661 494 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm44336-201ENSMUST00000203696 468 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm44472-201ENSMUST00000204922 943 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm2829-201ENSMUST00000213121 499 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm24045-201ENSMUST00000083113 98 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Snord22-201ENSMUST00000083153 126 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Olfr575-201ENSMUST00000084812 957 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm23741-201ENSMUST00000097237 171 ntBASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb3S4R1G7 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm23697-201ENSMUST00000103897 110 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm12137-201ENSMUST00000119565 346 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm14287-201ENSMUST00000121060 117 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm7308-201ENSMUST00000121087 447 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms