Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm44754-201ENSMUST00000208155 400 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm8942-201ENSMUST00000217892 400 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm23738-201ENSMUST00000082828 171 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22970-201ENSMUST00000083304 186 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm11576-201ENSMUST00000117433 417 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm13076-201ENSMUST00000118041 204 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm13804-201ENSMUST00000119552 172 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm14159-201ENSMUST00000119832 451 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm12825-201ENSMUST00000120249 563 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm14848-201ENSMUST00000121850 467 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm14804-201ENSMUST00000122322 508 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm24936-201ENSMUST00000122598 247 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm25572-201ENSMUST00000157527 172 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm24439-201ENSMUST00000157894 117 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm17183-201ENSMUST00000171170 493 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm28151-201ENSMUST00000189404 951 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm28211-201ENSMUST00000190920 315 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm18403-201ENSMUST00000192907 529 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm45080-201ENSMUST00000206648 283 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm45588-201ENSMUST00000211213 630 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm19441-201ENSMUST00000221545 330 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm23736-201ENSMUST00000082553 75 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm22572-201ENSMUST00000082985 105 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
H2afb1S4R1E0 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm14622-201ENSMUST00000117117 468 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm12149-201ENSMUST00000117511 654 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm11784-201ENSMUST00000118568 474 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm12156-201ENSMUST00000119188 554 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm12433-201ENSMUST00000119659 255 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm15112-201ENSMUST00000120152 860 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm14362-201ENSMUST00000121679 273 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm14765-201ENSMUST00000121954 326 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm6568-201ENSMUST00000122274 697 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm22199-201ENSMUST00000122660 126 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm15254-201ENSMUST00000149567 273 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Mir1934-201ENSMUST00000158127 83 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm17538-201ENSMUST00000168236 327 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Mir5112-201ENSMUST00000174897 60 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Mir6341-201ENSMUST00000183490 121 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm28163-201ENSMUST00000187099 325 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm43804-201ENSMUST00000198280 456 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm29848-201ENSMUST00000203107 295 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 Gm35558-203ENSMUST00000222264 204 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.84□□□□□ -1.95
H2afb1S4R1E0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms