Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm12238-201ENSMUST00000127764 124 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm22560-201ENSMUST00000157332 120 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Mir6386-201ENSMUST00000183558 104 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Mir6541-201ENSMUST00000183649 110 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm27608-201ENSMUST00000184822 162 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm45551-201ENSMUST00000211459 928 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm46193-201ENSMUST00000219399 364 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cldn9Q9Z0S7 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm24122-201ENSMUST00000104107 132 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Mir883a-201ENSMUST00000104824 76 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm11219-201ENSMUST00000118565 358 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm12935-201ENSMUST00000119352 246 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm15452-201ENSMUST00000119877 240 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm26099-201ENSMUST00000157248 109 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm22849-201ENSMUST00000157713 307 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm23032-201ENSMUST00000157995 107 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm23223-201ENSMUST00000158119 127 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm17119-201ENSMUST00000163943 280 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm27676-201ENSMUST00000183669 61 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm27505-201ENSMUST00000185071 110 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm42818-201ENSMUST00000198869 987 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm44256-201ENSMUST00000203304 335 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm17911-201ENSMUST00000210806 877 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.43□□□□□ -2.02
Cldn9Q9Z0S7 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Snora36b-201ENSMUST00000104383 132 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm26247-201ENSMUST00000116702 91 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Mir467h-201ENSMUST00000116759 121 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm12016-201ENSMUST00000119079 681 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm24958-201ENSMUST00000158009 97 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm20698-201ENSMUST00000175657 233 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm27470-201ENSMUST00000184070 210 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm28802-201ENSMUST00000188624 944 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm18692-201ENSMUST00000193047 511 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm19202-201ENSMUST00000198096 808 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm43264-201ENSMUST00000202284 325 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.42□□□□□ -2.02
Cldn9Q9Z0S7 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm14918-201ENSMUST00000118153 268 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm14982-201ENSMUST00000121102 442 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm12155-201ENSMUST00000121267 160 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm22390-201ENSMUST00000157588 325 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm24691-201ENSMUST00000157762 140 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.41□□□□□ -2.02
Cldn9Q9Z0S7 Gm20656-201ENSMUST00000176925 518 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms