Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm12765-201ENSMUST00000117273 615 ntBASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm3851-201ENSMUST00000168653 318 ntBASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.91□□□□□ -2.1
Scn11aQ9R053 Mir423-201ENSMUST00000083584 109 ntBASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.91□□□□□ -2.1
Scn11aQ9R053 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm6913-201ENSMUST00000100019 348 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Mir466i-201ENSMUST00000116924 121 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Gm25161-201ENSMUST00000158913 132 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Gm8532-201ENSMUST00000179174 461 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Mir7663-201ENSMUST00000183950 61 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Mir6950-201ENSMUST00000184438 73 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.9□□□□□ -2.1
Scn11aQ9R053 Gm43991-201ENSMUST00000203751 274 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.9□□□□□ -2.1
Scn11aQ9R053 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gm6395-201ENSMUST00000167639 691 ntBASIC1.9□□□□□ -2.11
Scn11aQ9R053 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gm44559-201ENSMUST00000207177 1012 ntBASIC1.9□□□□□ -2.11
Scn11aQ9R053 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gm18188-201ENSMUST00000219386 478 ntBASIC1.9□□□□□ -2.11
Scn11aQ9R053 Gm23096-201ENSMUST00000083447 107 ntBASIC1.9□□□□□ -2.11
Scn11aQ9R053 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm14163-201ENSMUST00000117342 217 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm14694-201ENSMUST00000121856 282 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm13409-201ENSMUST00000122072 546 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm24630-201ENSMUST00000122768 106 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm22563-201ENSMUST00000157333 269 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm22254-201ENSMUST00000179186 110 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm37417-201ENSMUST00000195257 454 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm16976-205ENSMUST00000227324 226 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 AC107369.1-201ENSMUST00000227373 860 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Mir196b-201ENSMUST00000083509 85 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm24445-201ENSMUST00000083981 107 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.89□□□□□ -2.11
Scn11aQ9R053 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Scn11aQ9R053 Gm23708-201ENSMUST00000104367 123 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm14923-201ENSMUST00000118270 155 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm12401-201ENSMUST00000118435 228 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm23083-201ENSMUST00000157851 116 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm24677-201ENSMUST00000158755 150 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm45048-201ENSMUST00000207058 429 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Scn11aQ9R053 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Scn11aQ9R053 Mir10b-201ENSMUST00000083566 68 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.88□□□□□ -2.11
Scn11aQ9R053 Gm13457-201ENSMUST00000117885 267 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm25365-201ENSMUST00000158852 121 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm3102-201ENSMUST00000164236 489 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.87□□□□□ -2.11
Scn11aQ9R053 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm12372-201ENSMUST00000121654 768 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Mir3098-201ENSMUST00000175416 87 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm19563-201ENSMUST00000222031 270 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.87□□□□□ -2.11
Scn11aQ9R053 Gm15116-201ENSMUST00000122248 663 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 Gm27427-201ENSMUST00000185134 193 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 Gm2142-201ENSMUST00000197899 589 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.86□□□□□ -2.11
Scn11aQ9R053 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.86□□□□□ -2.11
Scn11aQ9R053 Gm2066-201ENSMUST00000118046 389 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm2288-201ENSMUST00000118560 638 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm2318-201ENSMUST00000119623 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7438-201ENSMUST00000177664 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7408-201ENSMUST00000178014 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7386-201ENSMUST00000178020 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm3657-201ENSMUST00000178170 639 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms