Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm24719-201ENSMUST00000157520 110 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm26373-201ENSMUST00000157833 103 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm25464-201ENSMUST00000175481 107 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm43955-201ENSMUST00000204332 142 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm22248-201ENSMUST00000082482 150 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Snora44-201ENSMUST00000082670 129 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Msh5Q9QUM7 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm4736-201ENSMUST00000100870 380 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm12650-201ENSMUST00000121966 258 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm24747-201ENSMUST00000157835 87 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm26354-201ENSMUST00000158221 129 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm17113-201ENSMUST00000170118 171 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm27855-201ENSMUST00000184122 128 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm27781-201ENSMUST00000185185 92 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm37923-201ENSMUST00000191624 161 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm37308-201ENSMUST00000194684 100 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm44352-201ENSMUST00000196358 110 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm44214-201ENSMUST00000204153 606 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm22354-201ENSMUST00000083919 70 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm24163-201ENSMUST00000093660 132 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Msh5Q9QUM7 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm26078-201ENSMUST00000104067 128 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm12449-201ENSMUST00000117572 234 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm11737-201ENSMUST00000118713 468 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm22986-201ENSMUST00000122753 130 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm23855-201ENSMUST00000158377 135 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm23115-201ENSMUST00000158480 108 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Mir3095-201ENSMUST00000175552 87 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Mir7211-201ENSMUST00000184071 63 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm27668-201ENSMUST00000184188 120 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Mir8106-201ENSMUST00000184520 139 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm18177-201ENSMUST00000188373 404 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm9616-201ENSMUST00000221154 781 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm18441-201ENSMUST00000223539 617 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm22283-201ENSMUST00000082556 161 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm24166-201ENSMUST00000082724 135 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm23445-201ENSMUST00000082800 107 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm25257-201ENSMUST00000083907 110 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.51□□□□□ -1.53
Msh5Q9QUM7 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms