Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm14073-201ENSMUST00000117344 381 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm13806-201ENSMUST00000117822 325 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm26105-201ENSMUST00000157253 190 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm23324-201ENSMUST00000157421 131 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm23559-201ENSMUST00000157824 103 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm24534-201ENSMUST00000157949 291 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm22483-201ENSMUST00000157986 274 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm24075-201ENSMUST00000158175 72 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm27369-201ENSMUST00000185182 71 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm44049-201ENSMUST00000204905 2984 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm45772-201ENSMUST00000212961 240 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Gm7753-201ENSMUST00000221007 867 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trem3Q9JKE1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm12934-201ENSMUST00000119221 343 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm12313-201ENSMUST00000121347 421 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm25066-201ENSMUST00000158145 123 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm23813-201ENSMUST00000175153 77 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm27532-201ENSMUST00000183726 113 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm6651-201ENSMUST00000189471 271 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
Trem3Q9JKE1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm15159-201ENSMUST00000117062 764 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm26101-201ENSMUST00000157246 105 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Mir7016-201ENSMUST00000184308 72 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm27249-201ENSMUST00000185049 328 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Mir6372-201ENSMUST00000185114 109 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm28900-201ENSMUST00000185232 156 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm18985-201ENSMUST00000196472 1079 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm44966-201ENSMUST00000208096 157 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.66□□□□□ -2.14
Trem3Q9JKE1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Trem3Q9JKE1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm12640-201ENSMUST00000120097 310 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm24237-201ENSMUST00000157790 132 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm24770-201ENSMUST00000158505 92 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm23342-201ENSMUST00000158958 115 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm24417-201ENSMUST00000178123 79 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm24653-201ENSMUST00000178541 79 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm25934-201ENSMUST00000178642 79 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Mir6338-201ENSMUST00000183389 109 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm27753-201ENSMUST00000184742 203 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm7329-201ENSMUST00000185915 210 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm43043-201ENSMUST00000196579 412 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm18341-201ENSMUST00000197538 622 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Mir497-201ENSMUST00000200557 84 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trem3Q9JKE1 Gm25402-201ENSMUST00000082966 131 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms