Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm13614-201ENSMUST00000117306 503 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm13803-201ENSMUST00000117547 489 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm14392-201ENSMUST00000120332 401 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm14413-201ENSMUST00000122158 408 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm25637-201ENSMUST00000157529 107 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm25438-201ENSMUST00000158281 110 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm26335-201ENSMUST00000178449 107 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Mir6338-201ENSMUST00000183389 109 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Mir6363-201ENSMUST00000184880 114 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm21673-201ENSMUST00000186640 436 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm21135-201ENSMUST00000189023 436 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm29192-201ENSMUST00000190942 377 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Trbv24-201ENSMUST00000194614 347 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm45860-201ENSMUST00000212700 334 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm25135-201ENSMUST00000082648 143 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Mir21a-201ENSMUST00000083521 92 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm23741-201ENSMUST00000097237 171 ntBASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim54Q9ERP3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm8880-201ENSMUST00000121800 454 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm22633-201ENSMUST00000179834 107 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm44600-201ENSMUST00000208540 111 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm4921-201ENSMUST00000219804 992 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Ear14-201ENSMUST00000049559 468 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim54Q9ERP3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm12492-201ENSMUST00000117665 564 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm13167-201ENSMUST00000118554 578 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm11598-201ENSMUST00000119257 357 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm11849-201ENSMUST00000121293 261 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm14765-201ENSMUST00000121954 326 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm22452-201ENSMUST00000122804 104 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm5958-201ENSMUST00000147698 297 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Mir5101-201ENSMUST00000175181 83 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm28155-201ENSMUST00000191066 151 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm37085-201ENSMUST00000193780 196 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm8747-201ENSMUST00000195392 751 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm44142-201ENSMUST00000203358 311 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm44961-201ENSMUST00000207450 196 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm7495-201ENSMUST00000215099 426 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm35405-201ENSMUST00000218754 400 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Gm18696-201ENSMUST00000220103 274 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.63□□□□□ -1.83
Trim54Q9ERP3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim54Q9ERP3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm14558-201ENSMUST00000117458 381 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm14768-201ENSMUST00000122126 678 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm22718-201ENSMUST00000122701 315 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms