Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm11556-201ENSMUST00000120751 288 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm9001-201ENSMUST00000121642 399 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm25391-201ENSMUST00000157342 134 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm28637-201ENSMUST00000179424 345 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm24969-201ENSMUST00000180331 79 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Mir6338-201ENSMUST00000183389 109 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm3489-201ENSMUST00000190083 528 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm18410-201ENSMUST00000207199 577 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm23932-201ENSMUST00000082914 107 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm24044-201ENSMUST00000083107 156 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Snora69-201ENSMUST00000083708 131 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm15025-201ENSMUST00000118434 418 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm14651-201ENSMUST00000147192 442 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm26186-201ENSMUST00000157689 125 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm8580-201ENSMUST00000160295 464 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm17538-201ENSMUST00000168236 327 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm28900-201ENSMUST00000185232 156 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm17946-201ENSMUST00000186856 538 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm44634-201ENSMUST00000206119 152 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm18338-201ENSMUST00000222381 560 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.2□□□□□ -2.06
Lima1Q9ERG0 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm15844-201ENSMUST00000118016 576 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm14731-201ENSMUST00000119216 376 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm13581-201ENSMUST00000120675 278 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm14463-201ENSMUST00000121117 498 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm15986-201ENSMUST00000122153 400 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm26349-201ENSMUST00000157530 130 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm17183-201ENSMUST00000171170 493 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm24816-201ENSMUST00000175311 151 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm26365-201ENSMUST00000179177 94 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm22307-201ENSMUST00000180019 107 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm7329-201ENSMUST00000185915 210 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm44137-201ENSMUST00000203670 367 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm45791-201ENSMUST00000212908 352 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm21089-201ENSMUST00000215843 325 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Gm22154-201ENSMUST00000083844 131 ntBASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Lima1Q9ERG0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm16431-201ENSMUST00000117454 431 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm23463-201ENSMUST00000122468 99 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm24937-201ENSMUST00000122597 134 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm22755-201ENSMUST00000157143 100 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm24534-201ENSMUST00000157949 291 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm26214-201ENSMUST00000158581 107 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm8392-201ENSMUST00000185647 835 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm28399-201ENSMUST00000186221 318 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm28572-201ENSMUST00000187444 318 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm6651-201ENSMUST00000189471 271 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm29389-201ENSMUST00000191562 352 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm2719-201ENSMUST00000191929 444 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm37002-201ENSMUST00000194560 373 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.18□□□□□ -2.06
Lima1Q9ERG0 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Gm7753-201ENSMUST00000221007 867 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.18□□□□□ -2.06
Lima1Q9ERG0 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm22782-201ENSMUST00000104082 132 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm8569-201ENSMUST00000117630 647 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm15176-201ENSMUST00000117734 135 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm12881-201ENSMUST00000121191 203 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm9225-201ENSMUST00000121921 836 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm23889-201ENSMUST00000122689 104 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm15274-201ENSMUST00000131442 291 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm21979-201ENSMUST00000139887 291 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm15259-201ENSMUST00000151262 291 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms