Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm16111-201ENSMUST00000162128 285 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm17177-201ENSMUST00000169144 483 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm24080-201ENSMUST00000175178 232 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Mir3112-201ENSMUST00000175431 82 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm22776-201ENSMUST00000178634 94 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm23767-201ENSMUST00000179278 94 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Mir6901-201ENSMUST00000185062 62 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm37817-201ENSMUST00000195276 434 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Mir703-201ENSMUST00000197105 109 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm25097-201ENSMUST00000104042 145 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Gm13432-201ENSMUST00000118861 241 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Gm23234-201ENSMUST00000157304 134 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Gm27861-201ENSMUST00000183920 214 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Gm17911-201ENSMUST00000210806 877 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Gm8031-201ENSMUST00000213430 626 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
Scn4aQ9ER60 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm15846-201ENSMUST00000116022 320 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm13194-201ENSMUST00000142299 311 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Nron-204ENSMUST00000158971 370 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm23152-201ENSMUST00000175322 116 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm27796-201ENSMUST00000183863 261 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm9632-201ENSMUST00000195934 643 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm24261-201ENSMUST00000083744 104 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 BC051076-202ENSMUST00000199477 2868 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.08□□□□□ -1.92
Scn4aQ9ER60 Gm23585-201ENSMUST00000157656 102 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm18540-201ENSMUST00000204025 526 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm11252-201ENSMUST00000120572 939 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm6591-201ENSMUST00000121063 434 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm16569-201ENSMUST00000160526 314 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm17164-201ENSMUST00000169013 506 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm9022-202ENSMUST00000183285 483 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm25402-201ENSMUST00000082966 131 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm25628-201ENSMUST00000084002 105 ntBASIC3.07□□□□□ -1.92
Scn4aQ9ER60 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm12294-201ENSMUST00000119723 490 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm16363-201ENSMUST00000132460 877 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm22159-201ENSMUST00000158412 130 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm25026-201ENSMUST00000175017 188 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm29460-201ENSMUST00000188607 714 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.06□□□□□ -1.92
Scn4aQ9ER60 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.06□□□□□ -1.92
Scn4aQ9ER60 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms