Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm24727-201ENSMUST00000158231 144 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm25436-201ENSMUST00000158275 145 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm22435-201ENSMUST00000158552 128 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm28995-201ENSMUST00000186625 261 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm20923-201ENSMUST00000190009 319 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf1Q9EPU0 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm25539-201ENSMUST00000116886 122 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm13046-201ENSMUST00000117391 501 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm13672-201ENSMUST00000117554 459 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm12793-201ENSMUST00000119268 292 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm15167-201ENSMUST00000121997 187 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm26027-201ENSMUST00000122725 268 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm25283-201ENSMUST00000157272 77 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm22561-201ENSMUST00000157331 84 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm22843-201ENSMUST00000157710 134 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Nron-204ENSMUST00000158971 370 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm8207-201ENSMUST00000171204 502 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm25360-201ENSMUST00000178786 191 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm27733-201ENSMUST00000184803 68 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm7837-201ENSMUST00000190873 412 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm37030-201ENSMUST00000194254 295 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm44355-201ENSMUST00000200417 104 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm44389-201ENSMUST00000203795 182 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm17779-201ENSMUST00000213395 394 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm23406-201ENSMUST00000082537 122 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Mir370-201ENSMUST00000083499 79 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf1Q9EPU0 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upf1Q9EPU0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm23226-201ENSMUST00000116927 103 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm11398-201ENSMUST00000120330 320 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm7327-201ENSMUST00000120925 652 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm12779-201ENSMUST00000121496 143 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm23000-201ENSMUST00000157083 139 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm26041-201ENSMUST00000158148 108 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm22668-201ENSMUST00000158716 260 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm4644-201ENSMUST00000197587 400 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm9765-201ENSMUST00000043170 321 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm23510-201ENSMUST00000083083 163 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm25200-201ENSMUST00000083094 130 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.71□□□□□ -1.66
Upf1Q9EPU0 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm13518-201ENSMUST00000120018 233 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm15926-201ENSMUST00000120492 550 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm25341-201ENSMUST00000157461 268 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm26347-201ENSMUST00000157526 131 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm23415-201ENSMUST00000175519 83 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Mir5624-201ENSMUST00000176635 61 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm22951-201ENSMUST00000179471 107 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Mir6916-201ENSMUST00000184514 63 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm28148-201ENSMUST00000186924 697 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms