Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm19457-201ENSMUST00000200995 448 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm19709-201ENSMUST00000215403 482 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm26494-201ENSMUST00000083154 143 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Snord7-201ENSMUST00000083781 97 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm24493-201ENSMUST00000083805 143 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.42□□□□□ -2.02
Cdc40Q9DC48 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm26341-201ENSMUST00000104561 134 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm14918-201ENSMUST00000118153 268 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm11268-201ENSMUST00000118347 267 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm24922-201ENSMUST00000158511 102 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm24816-201ENSMUST00000175311 151 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm5224-201ENSMUST00000183060 350 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm38281-201ENSMUST00000192301 315 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Trbv7-201ENSMUST00000193339 402 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm42958-201ENSMUST00000197595 318 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm6615-201ENSMUST00000199426 631 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm44478-201ENSMUST00000204875 114 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm2544-201ENSMUST00000222702 756 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.41□□□□□ -2.02
Cdc40Q9DC48 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cdc40Q9DC48 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.4□□□□□ -2.02
Cdc40Q9DC48 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Mir682-201ENSMUST00000102281 96 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Mir466k-201ENSMUST00000116774 122 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm12598-201ENSMUST00000117333 830 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm14602-201ENSMUST00000118625 340 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm23599-201ENSMUST00000157261 251 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm24358-201ENSMUST00000158424 288 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm6788-201ENSMUST00000166459 270 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm17183-201ENSMUST00000171170 493 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm20698-201ENSMUST00000175657 233 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Mir7013-201ENSMUST00000183540 72 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm27861-201ENSMUST00000183920 214 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm8392-201ENSMUST00000185647 835 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm29641-201ENSMUST00000188955 259 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm42924-201ENSMUST00000197261 185 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm43901-201ENSMUST00000203247 453 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm44903-201ENSMUST00000206840 130 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm10343-201ENSMUST00000096279 348 ntBASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Cdc40Q9DC48 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm25317-201ENSMUST00000116824 129 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm14843-201ENSMUST00000119596 212 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm13627-201ENSMUST00000119700 706 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm14915-201ENSMUST00000120747 204 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm14368-201ENSMUST00000145305 415 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm22186-201ENSMUST00000157822 122 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm24075-201ENSMUST00000158175 72 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Mir8118-201ENSMUST00000183962 129 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm37213-201ENSMUST00000193077 586 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm44392-201ENSMUST00000196758 115 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms