Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23939-201ENSMUST00000082880 133 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm16431-201ENSMUST00000117454 431 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm15176-201ENSMUST00000117734 135 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm12871-201ENSMUST00000118758 438 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm26349-201ENSMUST00000157530 130 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm27599-201ENSMUST00000183758 174 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm21489-201ENSMUST00000189668 818 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm28169-201ENSMUST00000190342 345 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm37002-201ENSMUST00000194560 373 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Gm25792-201ENSMUST00000083289 100 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.23□□□□□ -2.05
Ccdc3Q9D6Y1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm2288-201ENSMUST00000118560 638 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13588-201ENSMUST00000120026 135 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13424-201ENSMUST00000122301 354 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm24968-201ENSMUST00000179817 107 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm24969-201ENSMUST00000180331 79 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm29389-201ENSMUST00000191562 352 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm42976-201ENSMUST00000200313 222 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm44212-201ENSMUST00000205016 897 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm18598-201ENSMUST00000207724 597 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Ccdc3Q9D6Y1 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm14652-201ENSMUST00000118479 235 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm15936-201ENSMUST00000118706 460 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm9001-201ENSMUST00000121642 399 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm12368-201ENSMUST00000122251 434 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm28399-201ENSMUST00000186221 318 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm28572-201ENSMUST00000187444 318 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.21□□□□□ -2.06
Ccdc3Q9D6Y1 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm14751-201ENSMUST00000117693 222 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm14020-201ENSMUST00000118165 662 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23463-201ENSMUST00000122468 99 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22073-201ENSMUST00000122668 189 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm12238-201ENSMUST00000127764 124 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23642-201ENSMUST00000157858 258 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm26365-201ENSMUST00000179177 94 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm37732-201ENSMUST00000194377 316 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 202.3 ms