Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm14785-201ENSMUST00000120185 539 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm24086-201ENSMUST00000175171 98 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm21638-201ENSMUST00000179473 836 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm44923-201ENSMUST00000206673 85 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm13343-201ENSMUST00000116474 105 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm12897-201ENSMUST00000120341 250 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm8880-201ENSMUST00000121800 454 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm22956-201ENSMUST00000122520 80 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm23791-201ENSMUST00000122553 293 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm22722-201ENSMUST00000157467 132 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm24439-201ENSMUST00000157894 117 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm22833-201ENSMUST00000158292 132 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Mir7j-201ENSMUST00000184427 122 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm28437-201ENSMUST00000190277 783 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm45101-201ENSMUST00000208327 232 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm7624-201ENSMUST00000209702 435 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm10237-201ENSMUST00000078393 273 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Gm22061-201ENSMUST00000082557 107 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.32□□□□□ -1.88
Vps28Q9D1C8 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26504-201ENSMUST00000102033 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm13085-201ENSMUST00000118356 171 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 AA413626-201ENSMUST00000121125 494 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25052-201ENSMUST00000122661 158 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26401-201ENSMUST00000158502 76 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26502-201ENSMUST00000177732 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25350-201ENSMUST00000177849 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm23446-201ENSMUST00000177977 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26201-201ENSMUST00000178047 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm24711-201ENSMUST00000178062 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm24609-201ENSMUST00000178166 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm23265-201ENSMUST00000178321 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm22812-201ENSMUST00000178329 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26246-201ENSMUST00000178388 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25155-201ENSMUST00000178450 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm24760-201ENSMUST00000178530 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm22285-201ENSMUST00000178576 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm22417-201ENSMUST00000178656 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26270-201ENSMUST00000178690 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm4479-201ENSMUST00000178807 171 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm23313-201ENSMUST00000178931 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm23089-201ENSMUST00000178947 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm24153-201ENSMUST00000179280 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25597-201ENSMUST00000179388 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25816-201ENSMUST00000179764 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm24264-201ENSMUST00000179835 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26188-201ENSMUST00000179963 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm26433-201ENSMUST00000180227 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm22128-201ENSMUST00000180346 94 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm28299-201ENSMUST00000189908 339 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm43245-201ENSMUST00000197603 468 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm45860-201ENSMUST00000212700 334 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms