Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm23273-201ENSMUST00000104058 135 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm24125-201ENSMUST00000104105 137 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm11923-201ENSMUST00000118135 508 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm13228-201ENSMUST00000118937 634 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm9308-201ENSMUST00000119073 448 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm11834-201ENSMUST00000122257 585 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm23752-201ENSMUST00000157584 115 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm22889-201ENSMUST00000158639 58 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm23028-201ENSMUST00000158773 265 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm21638-201ENSMUST00000179473 836 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Mir3620-201ENSMUST00000184710 61 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Mir691-201ENSMUST00000199719 78 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm43155-201ENSMUST00000202661 494 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 AL603630.1-201ENSMUST00000214781 147 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 CT009718.4-201ENSMUST00000221881 109 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 AC125379.1-201ENSMUST00000221928 111 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm24948-201ENSMUST00000082866 207 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Mir208a-201ENSMUST00000083498 83 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm22577-201ENSMUST00000083731 109 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Gm26165-201ENSMUST00000083791 138 ntBASIC4□□□□□ -1.77
Ddx56Q9D0R4 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ddx56Q9D0R4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm12255-201ENSMUST00000117184 284 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm12871-201ENSMUST00000118758 438 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm13737-201ENSMUST00000119793 232 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm23411-201ENSMUST00000157988 62 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm22136-201ENSMUST00000158751 268 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm24862-201ENSMUST00000179103 79 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm23310-201ENSMUST00000179105 79 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm25461-201ENSMUST00000179293 79 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Mir6943-201ENSMUST00000185186 66 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm7871-201ENSMUST00000195346 618 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm18429-201ENSMUST00000198707 421 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm19177-201ENSMUST00000204520 613 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ddx56Q9D0R4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm23697-201ENSMUST00000103897 110 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm5757-201ENSMUST00000117494 528 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm11600-201ENSMUST00000119592 240 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm12515-201ENSMUST00000120116 361 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm11982-201ENSMUST00000121480 314 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm5963-201ENSMUST00000143451 236 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm26866-201ENSMUST00000180414 802 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm27869-201ENSMUST00000184327 122 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm4854-201ENSMUST00000185902 574 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.98□□□□□ -1.77
Ddx56Q9D0R4 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms