Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm24856-201ENSMUST00000082809 107 ntBASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm22997-201ENSMUST00000082845 107 ntBASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm25258-201ENSMUST00000083049 107 ntBASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ssu72Q9CY97 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm15180-201ENSMUST00000117745 492 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm11698-201ENSMUST00000117948 455 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm15037-201ENSMUST00000120358 259 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm22482-201ENSMUST00000122563 359 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm6265-201ENSMUST00000149263 231 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm24188-201ENSMUST00000157980 108 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm24395-201ENSMUST00000158139 125 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm20401-201ENSMUST00000173717 212 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm5139-201ENSMUST00000175943 249 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm27940-201ENSMUST00000184449 98 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Mir7661-201ENSMUST00000197023 61 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm44513-201ENSMUST00000206811 439 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm44844-201ENSMUST00000207242 336 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm6056-201ENSMUST00000221253 488 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Ssu72Q9CY97 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm7853-201ENSMUST00000100708 478 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm14541-201ENSMUST00000118985 157 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm13873-201ENSMUST00000119208 427 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm24630-201ENSMUST00000122768 106 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm16303-201ENSMUST00000161498 390 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm17528-201ENSMUST00000171026 239 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm23638-201ENSMUST00000175073 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm23158-201ENSMUST00000175076 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm22907-201ENSMUST00000175198 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm22625-201ENSMUST00000175382 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm22875-201ENSMUST00000175449 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm25197-201ENSMUST00000175516 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm27857-201ENSMUST00000176930 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm26268-201ENSMUST00000177685 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm23681-201ENSMUST00000178821 126 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Mir6335-201ENSMUST00000184081 98 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm23625-201ENSMUST00000082457 100 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm24611-201ENSMUST00000083272 107 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Mir31-201ENSMUST00000083474 106 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm7381-201ENSMUST00000098958 300 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
Ssu72Q9CY97 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.21□□□□□ -1.73
Ssu72Q9CY97 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.21□□□□□ -1.73
Ssu72Q9CY97 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ssu72Q9CY97 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ssu72Q9CY97 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ssu72Q9CY97 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ssu72Q9CY97 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ssu72Q9CY97 Gm11718-201ENSMUST00000119942 537 ntBASIC4.21□□□□□ -1.74
Ssu72Q9CY97 Gm13692-201ENSMUST00000120774 371 ntBASIC4.21□□□□□ -1.74
Ssu72Q9CY97 Gm14875-201ENSMUST00000120881 319 ntBASIC4.21□□□□□ -1.74
Ssu72Q9CY97 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms