Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23053-201ENSMUST00000175136 96 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm22460-201ENSMUST00000175269 124 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm25535-201ENSMUST00000175364 125 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm24365-201ENSMUST00000175384 125 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm44310-201ENSMUST00000175424 126 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm22639-201ENSMUST00000175591 125 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm24979-201ENSMUST00000178626 126 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm25361-201ENSMUST00000179358 76 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm23144-201ENSMUST00000180226 107 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Mir6408-201ENSMUST00000183643 91 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm27660-201ENSMUST00000184028 208 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm27743-201ENSMUST00000185136 126 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm18964-201ENSMUST00000193013 563 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm42164-201ENSMUST00000198881 379 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm29848-201ENSMUST00000203107 295 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm45080-201ENSMUST00000206648 283 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm21007-201ENSMUST00000221024 326 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm19441-201ENSMUST00000221545 330 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm24268-201ENSMUST00000082990 110 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.06□□□□□ -1.92
Ddx28Q9CWT6 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm13167-201ENSMUST00000118554 578 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm6071-201ENSMUST00000119561 440 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm11359-201ENSMUST00000120039 567 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Mir1934-201ENSMUST00000158127 83 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm25902-201ENSMUST00000158493 318 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm25977-201ENSMUST00000158697 85 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm24819-201ENSMUST00000175094 166 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm25198-201ENSMUST00000178574 110 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm27527-201ENSMUST00000183903 99 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm8151-201ENSMUST00000184817 871 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm28299-201ENSMUST00000189908 339 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm28927-201ENSMUST00000191528 272 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm32340-201ENSMUST00000192883 259 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm37097-201ENSMUST00000193676 336 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm43115-201ENSMUST00000196244 160 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm35558-203ENSMUST00000222264 204 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm9762-201ENSMUST00000036976 444 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm5265-201ENSMUST00000076828 342 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm22739-201ENSMUST00000083437 160 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm23741-201ENSMUST00000097237 171 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ddx28Q9CWT6 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm23530-201ENSMUST00000104564 137 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm7123-201ENSMUST00000117647 213 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm15443-201ENSMUST00000118947 820 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm21729-201ENSMUST00000180058 664 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm21853-201ENSMUST00000180071 664 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm27313-201ENSMUST00000183500 142 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Mir7658-201ENSMUST00000184043 57 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm27539-201ENSMUST00000184971 224 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm28489-201ENSMUST00000186655 316 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm29495-201ENSMUST00000189319 664 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm45240-201ENSMUST00000211437 674 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms