Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm7071-201ENSMUST00000120458 462 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm25294-201ENSMUST00000122791 104 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm23865-201ENSMUST00000157723 97 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm27760-201ENSMUST00000185048 114 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm29658-201ENSMUST00000185404 230 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm6801-201ENSMUST00000190697 339 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm45513-201ENSMUST00000210228 376 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc43Q9CR29 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm13343-201ENSMUST00000116474 105 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm16171-201ENSMUST00000118004 324 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm11321-201ENSMUST00000121257 902 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm22452-201ENSMUST00000122804 104 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm22849-201ENSMUST00000157713 307 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm24240-201ENSMUST00000157785 135 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm17085-201ENSMUST00000165425 502 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Mir3066-201ENSMUST00000175296 83 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm25470-201ENSMUST00000175576 111 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm21638-201ENSMUST00000179473 836 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm29263-201ENSMUST00000188718 463 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm28384-201ENSMUST00000189079 463 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm43384-201ENSMUST00000200569 637 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm45048-201ENSMUST00000207058 429 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm45049-201ENSMUST00000207586 591 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Gm25582-201ENSMUST00000083412 110 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc43Q9CR29 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm14292-201ENSMUST00000118761 456 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm11582-201ENSMUST00000121041 236 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm23559-201ENSMUST00000157824 103 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm25360-201ENSMUST00000178786 191 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm28163-201ENSMUST00000187099 325 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm43901-201ENSMUST00000203247 453 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm45860-201ENSMUST00000212700 334 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm24707-201ENSMUST00000082812 107 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm23297-201ENSMUST00000083184 127 ntBASIC3.13□□□□□ -1.91
Ccdc43Q9CR29 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm12386-201ENSMUST00000117380 688 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm14877-201ENSMUST00000119803 478 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm8207-201ENSMUST00000171204 502 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm25748-201ENSMUST00000175487 70 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm36966-201ENSMUST00000192217 413 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm44688-201ENSMUST00000209083 537 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Gm18557-201ENSMUST00000218710 433 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Mir19a-201ENSMUST00000083482 82 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.12□□□□□ -1.91
Ccdc43Q9CR29 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc43Q9CR29 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc43Q9CR29 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms