Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm29604-201ENSMUST00000187176 163 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm28412-201ENSMUST00000187243 177 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm29516-201ENSMUST00000190402 468 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm37319-201ENSMUST00000193500 636 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm45427-201ENSMUST00000209572 1253 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm2446-201ENSMUST00000220144 772 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 AC125223.1-203ENSMUST00000225304 498 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 AC134335.1-201ENSMUST00000227626 329 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 AC125464.1-201ENSMUST00000228013 512 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm25796-201ENSMUST00000082645 163 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm22740-201ENSMUST00000083439 109 ntBASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
RTRAFQ9CQE8 Gm25420-201ENSMUST00000104216 127 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm11221-201ENSMUST00000117230 597 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm14020-201ENSMUST00000118165 662 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm7071-201ENSMUST00000120458 462 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm23799-201ENSMUST00000175559 120 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm24925-201ENSMUST00000178157 107 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm29641-201ENSMUST00000188955 259 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm37751-201ENSMUST00000192440 1198 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm43626-201ENSMUST00000198575 162 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Mir3069-201ENSMUST00000198802 65 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm44118-201ENSMUST00000204665 229 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm5373-201ENSMUST00000212113 1050 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm46136-201ENSMUST00000214730 565 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 AC107453.2-201ENSMUST00000227714 655 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Mir346-201ENSMUST00000083547 98 ntBASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RTRAFQ9CQE8 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm26075-201ENSMUST00000104062 121 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm6923-201ENSMUST00000118343 406 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm12016-201ENSMUST00000119079 681 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm14867-201ENSMUST00000120156 866 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm15900-201ENSMUST00000161584 342 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm17166-201ENSMUST00000172006 431 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm18448-201ENSMUST00000186286 599 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm17946-201ENSMUST00000186856 538 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm19193-201ENSMUST00000190263 590 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm6059-201ENSMUST00000196903 340 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm5317-201ENSMUST00000204445 847 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm8031-201ENSMUST00000213430 626 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm22265-201ENSMUST00000082947 116 ntBASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTRAFQ9CQE8 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm25213-201ENSMUST00000102388 113 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm22590-201ENSMUST00000104247 128 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm15936-201ENSMUST00000118706 460 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm24291-201ENSMUST00000157633 162 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm26189-201ENSMUST00000179879 107 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm25873-201ENSMUST00000180317 107 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms