Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm14973-201ENSMUST00000117248 255 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm13640-201ENSMUST00000118445 264 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm12513-201ENSMUST00000118617 352 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm25270-201ENSMUST00000122606 138 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm26005-201ENSMUST00000158802 134 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm17538-201ENSMUST00000168236 327 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm28755-201ENSMUST00000185773 199 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm29263-201ENSMUST00000188718 463 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm28384-201ENSMUST00000189079 463 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm28358-202ENSMUST00000189292 223 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm20776-201ENSMUST00000189940 700 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm38149-201ENSMUST00000191943 339 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm29747-201ENSMUST00000194764 585 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm43284-201ENSMUST00000200103 253 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm19649-201ENSMUST00000201126 822 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm29754-201ENSMUST00000206269 358 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Use1Q9CQ56 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Olfr815-201ENSMUST00000071557 951 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.39□□□□□ -2.03
Use1Q9CQ56 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm25621-201ENSMUST00000157223 114 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm23600-201ENSMUST00000157260 71 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm24905-201ENSMUST00000158129 104 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm22367-201ENSMUST00000178930 132 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm27428-201ENSMUST00000184289 110 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Mir8106-201ENSMUST00000184520 139 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm38311-201ENSMUST00000192945 165 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm18341-201ENSMUST00000197538 622 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm30534-201ENSMUST00000217928 207 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Use1Q9CQ56 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.38□□□□□ -2.03
Use1Q9CQ56 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Use1Q9CQ56 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm6954-201ENSMUST00000117416 225 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm14898-201ENSMUST00000120202 645 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm7327-201ENSMUST00000120925 652 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm2830-201ENSMUST00000140330 385 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm15279-201ENSMUST00000155593 288 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm23980-201ENSMUST00000157135 158 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm3025-201ENSMUST00000163454 489 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm2878-201ENSMUST00000170173 486 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm37104-201ENSMUST00000193278 196 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm7871-201ENSMUST00000195346 618 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm43193-201ENSMUST00000197732 441 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm45445-201ENSMUST00000209586 232 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm45879-201ENSMUST00000212521 392 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm2436-201ENSMUST00000219562 774 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm23650-201ENSMUST00000083355 70 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Mir423-201ENSMUST00000083584 109 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Olfr895-201ENSMUST00000093864 951 ntBASIC2.37□□□□□ -2.03
Use1Q9CQ56 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Use1Q9CQ56 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms