Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Mir137-201ENSMUST00000083635 73 ntBASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc28aQ8CEI3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm23747-201ENSMUST00000104228 131 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm5287-201ENSMUST00000120666 598 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm12006-201ENSMUST00000120786 403 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm25391-201ENSMUST00000157342 134 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm22727-201ENSMUST00000158090 116 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Mir6371-201ENSMUST00000184470 111 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm27249-201ENSMUST00000185049 328 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm37119-201ENSMUST00000195691 389 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Mir497-201ENSMUST00000200557 84 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc28aQ8CEI3 Gm13085-201ENSMUST00000118356 171 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm12156-201ENSMUST00000119188 554 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14840-201ENSMUST00000122135 594 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14129-201ENSMUST00000122436 291 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14651-201ENSMUST00000147192 442 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm24770-201ENSMUST00000158505 92 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Mir3066-201ENSMUST00000175296 83 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Mir3112-201ENSMUST00000175431 82 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Mir6950-201ENSMUST00000184438 73 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm28745-201ENSMUST00000190069 305 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm18340-201ENSMUST00000196342 609 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm17890-201ENSMUST00000221419 757 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.1□□□□□ -2.07
Ccdc28aQ8CEI3 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm27522-201ENSMUST00000183949 230 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm8392-201ENSMUST00000185647 835 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm29184-201ENSMUST00000190038 334 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm42578-201ENSMUST00000199960 194 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm44295-201ENSMUST00000203805 437 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm44720-201ENSMUST00000206076 260 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm45173-201ENSMUST00000206819 305 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm45791-201ENSMUST00000212908 352 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm19118-201ENSMUST00000222554 98 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc28aQ8CEI3 Gm24098-201ENSMUST00000102075 109 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25381-201ENSMUST00000102078 109 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22782-201ENSMUST00000104082 132 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26143-201ENSMUST00000104480 108 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm14677-201ENSMUST00000117866 486 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24417-201ENSMUST00000178123 79 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24653-201ENSMUST00000178541 79 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25934-201ENSMUST00000178642 79 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24968-201ENSMUST00000179817 107 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm44300-201ENSMUST00000196792 121 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24817-201ENSMUST00000093672 105 ntBASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Ccdc28aQ8CEI3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm11438-201ENSMUST00000121582 189 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24534-201ENSMUST00000157949 291 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms