Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm27592-201ENSMUST00000157729 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm22174-201ENSMUST00000175050 125 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm22692-201ENSMUST00000175055 125 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm27634-201ENSMUST00000175060 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm26460-201ENSMUST00000175061 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Mir5099-201ENSMUST00000175257 74 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm22460-201ENSMUST00000175269 124 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm25535-201ENSMUST00000175364 125 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm24365-201ENSMUST00000175384 125 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm44310-201ENSMUST00000175424 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm22639-201ENSMUST00000175591 125 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm24979-201ENSMUST00000178626 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm27743-201ENSMUST00000185136 126 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm36964-201ENSMUST00000191876 198 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm45146-201ENSMUST00000207108 221 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm19326-201ENSMUST00000219818 326 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm25800-201ENSMUST00000082636 134 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Snord47-201ENSMUST00000083034 77 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm24610-201ENSMUST00000083270 109 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm24889-201ENSMUST00000104388 132 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Mir208b-201ENSMUST00000104735 77 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm12255-201ENSMUST00000117184 284 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm12042-201ENSMUST00000120479 301 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm13009-201ENSMUST00000121307 267 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm23411-201ENSMUST00000157988 62 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm24858-201ENSMUST00000158058 323 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm20660-201ENSMUST00000177515 289 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm8600-201ENSMUST00000186320 905 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm22897-201ENSMUST00000197860 128 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm45730-201ENSMUST00000212560 395 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm35857-201ENSMUST00000212739 178 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm18488-201ENSMUST00000215082 364 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm22155-201ENSMUST00000083836 162 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.98□□□□□ -1.61
Usp40Q8BWR4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Usp40Q8BWR4 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm23744-201ENSMUST00000104231 149 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm14774-201ENSMUST00000117857 536 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm25333-201ENSMUST00000158035 246 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm25519-201ENSMUST00000158392 127 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm7953-201ENSMUST00000168278 469 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm9022-202ENSMUST00000183285 483 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm5058-201ENSMUST00000187331 463 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm19641-201ENSMUST00000188432 417 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm37104-201ENSMUST00000193278 196 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm42828-201ENSMUST00000199669 469 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm9068-201ENSMUST00000217393 455 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm2710-201ENSMUST00000073196 603 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm26228-201ENSMUST00000082512 107 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm25080-201ENSMUST00000082526 107 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm25518-201ENSMUST00000083864 107 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Usp40Q8BWR4 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.97□□□□□ -1.61
Usp40Q8BWR4 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Usp40Q8BWR4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm23697-201ENSMUST00000103897 110 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm14669-201ENSMUST00000118841 250 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm24439-201ENSMUST00000157894 117 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm22307-201ENSMUST00000180019 107 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Gm27928-201ENSMUST00000183747 256 ntBASIC4.96□□□□□ -1.62
Usp40Q8BWR4 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms