Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm21758-201ENSMUST00000179336 819 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm23648-201ENSMUST00000180301 107 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Mir8106-201ENSMUST00000184520 139 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm28688-201ENSMUST00000187301 268 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm29647-201ENSMUST00000188795 666 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm20832-201ENSMUST00000189076 665 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm28241-201ENSMUST00000190916 235 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm28504-201ENSMUST00000190977 666 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm31511-201ENSMUST00000193134 657 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm35843-201ENSMUST00000193716 666 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm30638-201ENSMUST00000195570 656 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm36728-201ENSMUST00000195782 665 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm18341-201ENSMUST00000197538 622 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm44478-201ENSMUST00000204875 114 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm6030-201ENSMUST00000078768 402 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Snora23-201ENSMUST00000082517 184 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm23506-201ENSMUST00000083077 107 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 AF357428-201ENSMUST00000083815 69 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm2768-201ENSMUST00000121062 250 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm24836-201ENSMUST00000122609 108 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm6265-201ENSMUST00000149263 231 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm23559-201ENSMUST00000157824 103 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm3102-201ENSMUST00000164236 489 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm25874-201ENSMUST00000178030 79 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm25873-201ENSMUST00000180317 107 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm19257-201ENSMUST00000186121 183 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm29516-201ENSMUST00000190402 468 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm19224-201ENSMUST00000190477 793 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm34701-202ENSMUST00000204685 360 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm25411-201ENSMUST00000083760 151 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.92□□□□□ -1.94
Ccdc40Q8BI79 Mir499-201ENSMUST00000102357 79 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm12386-201ENSMUST00000117380 688 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm14602-201ENSMUST00000118625 340 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm7071-201ENSMUST00000120458 462 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm15272-201ENSMUST00000120865 233 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm16533-201ENSMUST00000140035 228 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm22322-201ENSMUST00000157151 111 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm23865-201ENSMUST00000157723 97 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm23409-201ENSMUST00000158516 237 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm21726-201ENSMUST00000179654 392 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm17929-201ENSMUST00000186851 627 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm29184-201ENSMUST00000190038 334 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm37007-201ENSMUST00000194234 319 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm43384-201ENSMUST00000200569 637 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm43600-201ENSMUST00000202134 223 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm45522-201ENSMUST00000210784 166 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm9370-201ENSMUST00000222787 609 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.91□□□□□ -1.94
Ccdc40Q8BI79 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm14073-201ENSMUST00000117344 381 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm14897-201ENSMUST00000118213 207 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm28666-201ENSMUST00000186649 274 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm37319-201ENSMUST00000193500 636 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm29747-201ENSMUST00000194764 585 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm44554-201ENSMUST00000208738 147 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm22265-201ENSMUST00000082947 116 ntBASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Ccdc40Q8BI79 Gm14973-201ENSMUST00000117248 255 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm13349-201ENSMUST00000118436 411 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms