Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm25248-201ENSMUST00000175473 98 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm27636-201ENSMUST00000184528 122 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm27607-201ENSMUST00000185162 122 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm43979-201ENSMUST00000203179 475 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Mir343-201ENSMUST00000102360 75 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm12372-201ENSMUST00000121654 768 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm5929-201ENSMUST00000166883 487 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm45445-201ENSMUST00000209586 232 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ttc28Q80XJ3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm11433-201ENSMUST00000118318 228 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm11785-201ENSMUST00000120165 601 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Mir466m-201ENSMUST00000175052 84 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Mir6540-201ENSMUST00000184886 108 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm43954-201ENSMUST00000204634 544 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm45687-201ENSMUST00000209454 155 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 AC105169.1-201ENSMUST00000218912 1294 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm19244-201ENSMUST00000204340 253 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Gm7065-201ENSMUST00000222150 474 ntBASIC1.24□□□□□ -2.21
Ttc28Q80XJ3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm23152-201ENSMUST00000175322 116 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm28802-201ENSMUST00000188624 944 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm29552-201ENSMUST00000190548 660 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Mir1892-201ENSMUST00000197752 80 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm9068-201ENSMUST00000217393 455 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm15526-201ENSMUST00000112504 204 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm12934-201ENSMUST00000119221 343 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm25715-201ENSMUST00000158627 125 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm29263-201ENSMUST00000188718 463 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm28384-201ENSMUST00000189079 463 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm3690-201ENSMUST00000211341 262 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.23□□□□□ -2.21
Ttc28Q80XJ3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm5967-201ENSMUST00000172723 494 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Mir6950-201ENSMUST00000184438 73 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm43371-201ENSMUST00000202838 1031 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm27580-201ENSMUST00000183666 149 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Gm44817-201ENSMUST00000205416 453 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.22□□□□□ -2.21
Ttc28Q80XJ3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm12386-201ENSMUST00000117380 688 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm15116-201ENSMUST00000122248 663 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm17062-201ENSMUST00000166987 461 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm25312-201ENSMUST00000178972 107 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm11395-201ENSMUST00000181011 499 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm27921-201ENSMUST00000183968 108 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 BC051076-202ENSMUST00000199477 2868 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm15148-201ENSMUST00000117602 156 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Mir196b-201ENSMUST00000083509 85 ntBASIC1.21□□□□□ -2.22
Ttc28Q80XJ3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Ttc28Q80XJ3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.2□□□□□ -2.22
Ttc28Q80XJ3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.2□□□□□ -2.22
Ttc28Q80XJ3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms