Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm42976-201ENSMUST00000200313 222 ntBASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Gm18414-201ENSMUST00000210858 694 ntBASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim17Q7TPM3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm14677-201ENSMUST00000117866 486 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm11556-201ENSMUST00000120751 288 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm24417-201ENSMUST00000178123 79 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm24653-201ENSMUST00000178541 79 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm25934-201ENSMUST00000178642 79 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm28011-201ENSMUST00000184097 175 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm44137-201ENSMUST00000203670 367 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm44720-201ENSMUST00000206076 260 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.61□□□□□ -1.99
Trim17Q7TPM3 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm14848-201ENSMUST00000121850 467 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm25391-201ENSMUST00000157342 134 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm24773-201ENSMUST00000158513 99 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm24876-201ENSMUST00000158780 92 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm22776-201ENSMUST00000178634 94 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm23767-201ENSMUST00000179278 94 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm44300-201ENSMUST00000196792 121 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm43804-201ENSMUST00000198280 456 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm44477-201ENSMUST00000199661 110 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Gm25792-201ENSMUST00000083289 100 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Mir137-201ENSMUST00000083635 73 ntBASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Trim17Q7TPM3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Mir3112-201ENSMUST00000175431 82 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm27715-201ENSMUST00000184714 260 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm17893-201ENSMUST00000203017 770 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm3442-201ENSMUST00000216808 710 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm25799-201ENSMUST00000082643 107 ntBASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Trim17Q7TPM3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.59□□□□□ -2
Trim17Q7TPM3 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim17Q7TPM3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm14073-201ENSMUST00000117344 381 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm22755-201ENSMUST00000157143 100 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm28637-201ENSMUST00000179424 345 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Mir6338-201ENSMUST00000183389 109 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm7329-201ENSMUST00000185915 210 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm29184-201ENSMUST00000190038 334 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm37946-201ENSMUST00000192064 347 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.58□□□□□ -2
Trim17Q7TPM3 Gm37989-201ENSMUST00000195202 803 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms