Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm14622-201ENSMUST00000117117 468 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm11845-201ENSMUST00000117886 327 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm25107-201ENSMUST00000122472 129 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm22452-201ENSMUST00000122804 104 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm22563-201ENSMUST00000157333 269 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm25391-201ENSMUST00000157342 134 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm25163-201ENSMUST00000158905 104 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm27374-201ENSMUST00000183660 81 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm27660-201ENSMUST00000184028 208 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm28151-201ENSMUST00000189404 951 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm28299-201ENSMUST00000189908 339 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm18964-201ENSMUST00000193013 563 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm18982-201ENSMUST00000198118 529 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm43217-201ENSMUST00000199513 367 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm45778-201ENSMUST00000211959 153 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Smarca1Q6PGB8 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm22936-201ENSMUST00000103955 126 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm23791-201ENSMUST00000122553 293 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm10075-201ENSMUST00000162030 545 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Mir5136-201ENSMUST00000175573 76 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm28650-201ENSMUST00000188413 411 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Gm22572-201ENSMUST00000082985 105 ntBASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smarca1Q6PGB8 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.65□□□□□ -1.82
Smarca1Q6PGB8 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smarca1Q6PGB8 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smarca1Q6PGB8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smarca1Q6PGB8 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Smarca1Q6PGB8 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm6762-201ENSMUST00000121769 289 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm8880-201ENSMUST00000121800 454 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm24627-201ENSMUST00000122764 138 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm25807-201ENSMUST00000122783 305 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm28781-201ENSMUST00000185760 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm29574-201ENSMUST00000186226 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm28828-201ENSMUST00000186601 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm21673-201ENSMUST00000186640 436 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm29216-201ENSMUST00000187117 492 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm29307-201ENSMUST00000187367 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm21135-201ENSMUST00000189023 436 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm29339-201ENSMUST00000189613 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm28159-201ENSMUST00000190296 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm29407-201ENSMUST00000191468 696 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm38395-201ENSMUST00000199904 830 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm44011-201ENSMUST00000203336 394 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm44041-201ENSMUST00000203678 396 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm45105-201ENSMUST00000207824 397 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm35558-203ENSMUST00000222264 204 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm22974-201ENSMUST00000083301 103 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms