Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm23679-201ENSMUST00000083161 119 ntBASIC3.81□□□□□ -1.8
Sp140Q6NSQ5 Gm25141-201ENSMUST00000083177 107 ntBASIC3.81□□□□□ -1.8
Sp140Q6NSQ5 Gm24522-201ENSMUST00000083964 108 ntBASIC3.81□□□□□ -1.8
Sp140Q6NSQ5 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.81□□□□□ -1.8
Sp140Q6NSQ5 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.81□□□□□ -1.8
Sp140Q6NSQ5 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm14622-201ENSMUST00000117117 468 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm14627-201ENSMUST00000118931 567 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm13155-201ENSMUST00000119277 646 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm8178-201ENSMUST00000121570 646 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm22988-201ENSMUST00000122759 144 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm24876-201ENSMUST00000158780 92 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Mir713-201ENSMUST00000178651 108 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm44858-201ENSMUST00000207360 154 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm45523-201ENSMUST00000210712 799 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm19326-201ENSMUST00000219818 326 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sp140Q6NSQ5 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm25943-201ENSMUST00000103791 90 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm11577-201ENSMUST00000118030 737 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm13510-201ENSMUST00000118659 429 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm11600-201ENSMUST00000119592 240 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm12640-201ENSMUST00000120097 310 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm12884-201ENSMUST00000120371 325 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm7308-201ENSMUST00000121087 447 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm8880-201ENSMUST00000121800 454 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm14578-201ENSMUST00000122166 391 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm22816-201ENSMUST00000157450 117 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm22531-201ENSMUST00000158819 140 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm24811-201ENSMUST00000175313 100 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm25285-201ENSMUST00000178951 90 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm21088-201ENSMUST00000190875 316 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm5829-201ENSMUST00000191383 351 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm45730-201ENSMUST00000212560 395 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm45814-201ENSMUST00000212646 775 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm24045-201ENSMUST00000083113 98 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm26165-201ENSMUST00000083791 138 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.79□□□□□ -1.8
Sp140Q6NSQ5 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm23256-201ENSMUST00000102235 110 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm26140-201ENSMUST00000103807 110 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Snord66-201ENSMUST00000104051 75 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm11874-201ENSMUST00000117437 130 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm11862-201ENSMUST00000119678 659 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm14852-201ENSMUST00000120065 647 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.78□□□□□ -1.8
Sp140Q6NSQ5 Gm5963-201ENSMUST00000143451 236 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms