Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm42774-201ENSMUST00000198854 283 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm12515-201ENSMUST00000120116 361 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm23183-201ENSMUST00000122595 323 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm26187-201ENSMUST00000157693 101 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Snora24-201ENSMUST00000174989 130 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm19427-201ENSMUST00000183619 208 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm27580-201ENSMUST00000183666 149 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Gm45063-201ENSMUST00000203726 472 ntBASIC1.16□□□□□ -2.22
Col7a1Q63870 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col7a1Q63870 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col7a1Q63870 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col7a1Q63870 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.15□□□□□ -2.22
Col7a1Q63870 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm15526-201ENSMUST00000112504 204 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm15157-201ENSMUST00000121852 702 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm25883-201ENSMUST00000157781 271 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm44830-201ENSMUST00000207667 584 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm8125-201ENSMUST00000216602 738 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm15282-201ENSMUST00000117707 300 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm12587-201ENSMUST00000120180 427 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Col7a1Q63870 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.15□□□□□ -2.23
Col7a1Q63870 Mir6405-201ENSMUST00000184584 124 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm18964-201ENSMUST00000193013 563 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm33866-201ENSMUST00000196911 289 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm20948-201ENSMUST00000211091 449 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.15□□□□□ -2.23
Col7a1Q63870 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Col7a1Q63870 Gm8224-201ENSMUST00000166178 497 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm43550-201ENSMUST00000200597 303 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm25806-201ENSMUST00000122782 122 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.14□□□□□ -2.23
Col7a1Q63870 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.14□□□□□ -2.23
Col7a1Q63870 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Col7a1Q63870 Gm23256-201ENSMUST00000102235 110 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm24572-201ENSMUST00000175505 88 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm45456-201ENSMUST00000210841 243 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.13□□□□□ -2.23
Col7a1Q63870 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Col7a1Q63870 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Col7a1Q63870 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm11876-201ENSMUST00000120002 269 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm24594-201ENSMUST00000122502 99 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm25106-201ENSMUST00000122672 134 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 AC107369.1-201ENSMUST00000227373 860 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm25409-201ENSMUST00000083764 131 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.13□□□□□ -2.23
Col7a1Q63870 Gm23705-201ENSMUST00000104370 130 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm28060-201ENSMUST00000191554 189 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.12□□□□□ -2.23
Col7a1Q63870 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm14815-201ENSMUST00000120060 488 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm13419-201ENSMUST00000121711 271 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm25555-201ENSMUST00000158078 111 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm44076-201ENSMUST00000203072 520 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Col7a1Q63870 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm11785-201ENSMUST00000120165 601 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm14366-201ENSMUST00000121970 730 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm23278-201ENSMUST00000157911 143 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm27977-201ENSMUST00000185159 111 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Gm3442-201ENSMUST00000216808 710 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Mir141-201ENSMUST00000083540 72 ntBASIC1.12□□□□□ -2.23
Col7a1Q63870 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm14876-201ENSMUST00000120795 327 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm15530-201ENSMUST00000122206 555 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm27607-201ENSMUST00000185162 122 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm37616-201ENSMUST00000193974 322 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm19649-201ENSMUST00000201126 822 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.11□□□□□ -2.23
Col7a1Q63870 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Col7a1Q63870 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm38332-201ENSMUST00000194189 147 ntBASIC1.11□□□□□ -2.23
Col7a1Q63870 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC1.11□□□□□ -2.23
Col7a1Q63870 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.11□□□□□ -2.23
Col7a1Q63870 Gm43201-201ENSMUST00000195925 3416 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms