Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm14867-201ENSMUST00000120156 866 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm14768-201ENSMUST00000122126 678 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.68□□□□□ -1.82
CtcfQ61164 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm24314-201ENSMUST00000158274 123 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm26141-201ENSMUST00000175299 126 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm25670-201ENSMUST00000178423 107 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm26239-201ENSMUST00000178842 107 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm24267-201ENSMUST00000179841 107 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm26960-201ENSMUST00000182263 412 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm18486-201ENSMUST00000184040 298 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Mir6917-201ENSMUST00000184111 61 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm28700-201ENSMUST00000187614 579 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm18403-201ENSMUST00000192907 529 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Trbv8-201ENSMUST00000194020 285 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm6510-201ENSMUST00000195916 574 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm19243-201ENSMUST00000198592 269 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm44720-201ENSMUST00000206076 260 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm18703-201ENSMUST00000215318 333 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 Ear14-201ENSMUST00000049559 468 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm24292-201ENSMUST00000082888 107 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.67□□□□□ -1.82
CtcfQ61164 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Snord70-201ENSMUST00000104157 87 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm12125-201ENSMUST00000117261 736 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm14669-201ENSMUST00000118841 250 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm13627-201ENSMUST00000119700 706 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm25341-201ENSMUST00000157461 268 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm10357-201ENSMUST00000159886 264 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm4076-201ENSMUST00000179230 965 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm43415-201ENSMUST00000201934 750 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm35405-201ENSMUST00000218754 400 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm17890-201ENSMUST00000221419 757 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Gm25859-201ENSMUST00000083710 91 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm25512-201ENSMUST00000083863 107 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Gm25630-201ENSMUST00000084000 162 ntBASIC3.67□□□□□ -1.82
CtcfQ61164 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CtcfQ61164 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CtcfQ61164 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CtcfQ61164 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CtcfQ61164 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CtcfQ61164 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CtcfQ61164 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm15399-201ENSMUST00000118055 724 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm11219-201ENSMUST00000118565 358 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm24836-201ENSMUST00000122609 108 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm23666-201ENSMUST00000158053 116 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm22765-201ENSMUST00000158371 128 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm17119-201ENSMUST00000163943 280 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm21638-201ENSMUST00000179473 836 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Mir6372-201ENSMUST00000185114 109 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm44266-201ENSMUST00000205235 500 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm18921-201ENSMUST00000221798 366 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm26128-201ENSMUST00000083170 110 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CtcfQ61164 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms