Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm15760-201ENSMUST00000119553 283 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm15106-201ENSMUST00000119691 821 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm16363-201ENSMUST00000132460 877 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm22159-201ENSMUST00000158412 130 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm5967-201ENSMUST00000172723 494 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm25412-201ENSMUST00000180258 107 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm32175-201ENSMUST00000193641 346 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm44300-201ENSMUST00000196792 121 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 Snora33-201ENSMUST00000093556 129 ntBASIC2.27□□□□□ -2.05
Ccdc88aQ5SNZ0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm13627-201ENSMUST00000119700 706 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm24840-201ENSMUST00000122603 147 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm25979-201ENSMUST00000157177 138 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Mir1927-201ENSMUST00000158579 109 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm44266-201ENSMUST00000205235 500 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm7675-201ENSMUST00000208828 686 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm12934-201ENSMUST00000119221 343 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm22083-201ENSMUST00000157586 102 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm6801-201ENSMUST00000190697 339 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm5731-201ENSMUST00000190969 481 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm43142-201ENSMUST00000198670 361 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm18268-201ENSMUST00000208445 943 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm18645-202ENSMUST00000212222 760 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.26□□□□□ -2.05
Ccdc88aQ5SNZ0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm25090-201ENSMUST00000104000 132 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm22494-201ENSMUST00000104495 128 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm12137-201ENSMUST00000119565 346 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm9225-201ENSMUST00000121921 836 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Mir3968-201ENSMUST00000175355 100 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm43115-201ENSMUST00000196244 160 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm43897-201ENSMUST00000204019 309 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.25□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm22673-201ENSMUST00000104415 131 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm8292-201ENSMUST00000162574 396 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm37692-201ENSMUST00000192633 232 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm15235-201ENSMUST00000200572 194 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm44533-201ENSMUST00000207782 268 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm24044-201ENSMUST00000083107 156 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm14591-201ENSMUST00000120407 518 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm7350-201ENSMUST00000120964 636 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm27544-201ENSMUST00000185069 155 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm19233-201ENSMUST00000219772 936 ntBASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc88aQ5SNZ0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm22208-201ENSMUST00000122658 110 ntBASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm28404-201ENSMUST00000190242 453 ntBASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm42474-201ENSMUST00000201073 505 ntBASIC2.23□□□□□ -2.05
Ccdc88aQ5SNZ0 Gm35931-201ENSMUST00000203931 448 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms