Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29299-201ENSMUST00000185609 923 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm28399-201ENSMUST00000186221 318 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm28572-201ENSMUST00000187444 318 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29573-201ENSMUST00000190291 919 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm44720-201ENSMUST00000206076 260 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm29920-201ENSMUST00000206876 754 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm45513-201ENSMUST00000210228 376 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm7753-201ENSMUST00000221007 867 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm2544-201ENSMUST00000222702 756 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm44286-201ENSMUST00000204098 1487 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm22370-201ENSMUST00000102422 83 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm22019-201ENSMUST00000104359 96 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm16082-201ENSMUST00000115992 377 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm14674-201ENSMUST00000117816 342 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm9703-201ENSMUST00000119573 343 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm11359-201ENSMUST00000120039 567 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm14867-201ENSMUST00000120156 866 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm22963-201ENSMUST00000157960 91 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm25866-201ENSMUST00000158245 112 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm24878-201ENSMUST00000158782 104 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm26991-201ENSMUST00000180950 620 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Mir3620-201ENSMUST00000184710 61 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm29550-201ENSMUST00000185543 285 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm29335-201ENSMUST00000188361 459 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm44161-201ENSMUST00000203532 253 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm7676-201ENSMUST00000084055 319 ntBASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
Trav3-1Q5R1I8 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 469.5 ms