Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm25863-201ENSMUST00000158249 329 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm22693-201ENSMUST00000175049 442 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm18415-201ENSMUST00000177464 647 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm29492-201ENSMUST00000187124 457 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm43193-201ENSMUST00000197732 441 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm45791-201ENSMUST00000212908 352 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm3442-201ENSMUST00000216808 710 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Trav5d-4Q5R1F6 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.84□□□□□ -2.12
Trav5d-4Q5R1F6 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.84□□□□□ -2.12
Trav5d-4Q5R1F6 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12071-201ENSMUST00000121968 469 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22755-201ENSMUST00000157143 100 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22776-201ENSMUST00000178634 94 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm23767-201ENSMUST00000179278 94 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.83□□□□□ -2.12
Trav5d-4Q5R1F6 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm14073-201ENSMUST00000117344 381 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm8569-201ENSMUST00000117630 647 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm13806-201ENSMUST00000117822 325 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12721-201ENSMUST00000120621 268 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm14463-201ENSMUST00000121117 498 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12313-201ENSMUST00000121347 421 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24534-201ENSMUST00000157949 291 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm17072-201ENSMUST00000166673 658 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24968-201ENSMUST00000179817 107 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm27399-201ENSMUST00000184250 78 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm2719-201ENSMUST00000191929 444 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm44818-201ENSMUST00000206608 358 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm44966-201ENSMUST00000208096 157 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm23932-201ENSMUST00000082914 107 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24044-201ENSMUST00000083107 156 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.82□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm25529-201ENSMUST00000104850 92 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm14894-201ENSMUST00000117170 270 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm26105-201ENSMUST00000157253 190 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm23559-201ENSMUST00000157824 103 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm6651-201ENSMUST00000189471 271 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm37449-201ENSMUST00000193016 270 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm18658-201ENSMUST00000195558 270 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm19089-201ENSMUST00000197207 613 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm43284-201ENSMUST00000200103 253 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Gm17893-201ENSMUST00000203017 770 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Snora69-201ENSMUST00000083708 131 ntBASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22674-201ENSMUST00000104413 131 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24068-201ENSMUST00000104513 132 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms