Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc88bQ4QRL3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.45□□□□□ -2.02
Ccdc88bQ4QRL3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.45□□□□□ -2.02
Ccdc88bQ4QRL3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.45□□□□□ -2.02
Ccdc88bQ4QRL3 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.45□□□□□ -2.02
Ccdc88bQ4QRL3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Gm23708-201ENSMUST00000104367 123 ntBASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Mir6351-201ENSMUST00000183826 99 ntBASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Gm29553-201ENSMUST00000189692 279 ntBASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Mir30d-201ENSMUST00000083503 82 ntBASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ccdc88bQ4QRL3 Gm22026-201ENSMUST00000122735 281 ntBASIC2.43□□□□□ -2.02
Ccdc88bQ4QRL3 Gm8532-201ENSMUST00000179174 461 ntBASIC2.43□□□□□ -2.02
Ccdc88bQ4QRL3 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc88bQ4QRL3 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.43□□□□□ -2.02
Ccdc88bQ4QRL3 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.43□□□□□ -2.02
Ccdc88bQ4QRL3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Mir7063-201ENSMUST00000184158 91 ntBASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Gm23677-201ENSMUST00000083156 104 ntBASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc88bQ4QRL3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Gm25365-201ENSMUST00000158852 121 ntBASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.41□□□□□ -2.02
Ccdc88bQ4QRL3 Gm6913-201ENSMUST00000100019 348 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm15108-201ENSMUST00000116160 803 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm15111-201ENSMUST00000122142 878 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm24546-201ENSMUST00000158652 102 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Mir7663-201ENSMUST00000183950 61 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm18188-201ENSMUST00000219386 478 ntBASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.4□□□□□ -2.02
Ccdc88bQ4QRL3 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.4□□□□□ -2.03
Ccdc88bQ4QRL3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Ccdc88bQ4QRL3 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm12351-201ENSMUST00000118727 292 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm23328-201ENSMUST00000157418 132 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm23636-201ENSMUST00000175070 95 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm22780-201ENSMUST00000104084 132 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm13355-201ENSMUST00000117996 317 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm14905-201ENSMUST00000122351 639 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm23122-201ENSMUST00000157645 103 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm42834-201ENSMUST00000196845 256 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm5322-201ENSMUST00000206142 699 ntBASIC2.39□□□□□ -2.03
Ccdc88bQ4QRL3 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm43070-201ENSMUST00000196938 415 ntBASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm24406-201ENSMUST00000083026 128 ntBASIC2.38□□□□□ -2.03
Ccdc88bQ4QRL3 Gm14930-201ENSMUST00000118864 652 ntBASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm12294-201ENSMUST00000119723 490 ntBASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm37119-201ENSMUST00000195691 389 ntBASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm44462-201ENSMUST00000199696 129 ntBASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Gm24252-201ENSMUST00000083700 132 ntBASIC2.37□□□□□ -2.03
Ccdc88bQ4QRL3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Gm28058-201ENSMUST00000186421 264 ntBASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Gm43723-201ENSMUST00000196886 189 ntBASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Gm44076-201ENSMUST00000203072 520 ntBASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc88bQ4QRL3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 Gm15148-201ENSMUST00000117602 156 ntBASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.35□□□□□ -2.03
Ccdc88bQ4QRL3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm25971-201ENSMUST00000158953 286 ntBASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm37337-201ENSMUST00000192601 993 ntBASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms