Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25817-201ENSMUST00000177758 121 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm24766-201ENSMUST00000179182 121 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm27527-201ENSMUST00000183903 99 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm27919-201ENSMUST00000185163 107 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm5116-201ENSMUST00000187732 463 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm29627-201ENSMUST00000187984 463 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm29950-201ENSMUST00000195273 237 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm43521-201ENSMUST00000197838 255 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm43107-201ENSMUST00000198729 255 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm44609-201ENSMUST00000207157 460 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm45366-201ENSMUST00000209828 384 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm46193-201ENSMUST00000219399 364 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm23736-201ENSMUST00000082553 75 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm25856-201ENSMUST00000082786 75 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Mir346-201ENSMUST00000083547 98 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm14656-201ENSMUST00000120342 502 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm12770-201ENSMUST00000121734 462 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm6762-201ENSMUST00000121769 289 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm26100-201ENSMUST00000157245 127 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm22555-201ENSMUST00000157801 62 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm24876-201ENSMUST00000158780 92 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm22853-201ENSMUST00000174974 131 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Spin2g-201ENSMUST00000178425 687 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm29602-201ENSMUST00000186887 442 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm37568-201ENSMUST00000191755 364 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm18296-201ENSMUST00000192475 783 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm37757-201ENSMUST00000193072 210 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm42665-201ENSMUST00000202100 586 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm43991-201ENSMUST00000203751 274 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm5265-201ENSMUST00000076828 342 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Snora23-201ENSMUST00000082517 184 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm22508-201ENSMUST00000082772 110 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm26055-201ENSMUST00000083038 107 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Gm23645-201ENSMUST00000083228 108 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Mir184-201ENSMUST00000083662 69 ntBASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim40Q3UWA4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm11576-201ENSMUST00000117433 417 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm14366-201ENSMUST00000121970 730 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm23078-201ENSMUST00000157848 148 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm24438-201ENSMUST00000157893 115 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm24532-201ENSMUST00000157951 286 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm24736-201ENSMUST00000158862 130 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Mir3104-201ENSMUST00000174911 63 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm21758-201ENSMUST00000179336 819 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm29647-201ENSMUST00000188795 666 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm20832-201ENSMUST00000189076 665 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm29553-201ENSMUST00000189692 279 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm29330-201ENSMUST00000190032 699 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm28241-201ENSMUST00000190916 235 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm28504-201ENSMUST00000190977 666 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm28098-201ENSMUST00000191361 699 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm31511-201ENSMUST00000193134 657 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm35843-201ENSMUST00000193716 666 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm30638-201ENSMUST00000195570 656 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm36728-201ENSMUST00000195782 665 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm44391-201ENSMUST00000198490 93 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm7946-201ENSMUST00000203326 958 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim40Q3UWA4 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.8□□□□□ -1.96
Trim40Q3UWA4 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms