Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm25466-201ENSMUST00000103995 132 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm14518-201ENSMUST00000117351 542 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm9850-201ENSMUST00000117916 227 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm12954-201ENSMUST00000118610 611 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm11429-201ENSMUST00000119089 144 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm8260-201ENSMUST00000119230 353 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm14008-201ENSMUST00000120483 274 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm13720-201ENSMUST00000120741 196 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm14915-201ENSMUST00000120747 204 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm11891-201ENSMUST00000121241 619 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm22026-201ENSMUST00000122735 281 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm22236-201ENSMUST00000157093 106 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm22733-201ENSMUST00000158094 91 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm23352-201ENSMUST00000158428 64 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm9593-201ENSMUST00000166034 469 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm25194-201ENSMUST00000177987 79 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm24925-201ENSMUST00000178157 107 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Npn2-202ENSMUST00000189275 235 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm44425-201ENSMUST00000203739 429 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Trafd1Q3UDK1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
Trafd1Q3UDK1 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm23577-201ENSMUST00000103950 110 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm8858-201ENSMUST00000118259 342 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm13239-201ENSMUST00000119920 637 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm23118-201ENSMUST00000122657 187 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm16533-201ENSMUST00000140035 228 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm22561-201ENSMUST00000157331 84 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm26960-201ENSMUST00000182263 412 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm19257-201ENSMUST00000186121 183 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm35931-201ENSMUST00000203931 448 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm45048-201ENSMUST00000207058 429 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trafd1Q3UDK1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm25088-201ENSMUST00000101803 79 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm22072-201ENSMUST00000116850 121 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm14793-201ENSMUST00000118739 311 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm12137-201ENSMUST00000119565 346 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm2020-201ENSMUST00000145242 579 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm26348-201ENSMUST00000157528 240 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm26215-201ENSMUST00000158584 139 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm25360-201ENSMUST00000178786 191 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm28666-201ENSMUST00000186649 274 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm18775-201ENSMUST00000190763 586 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm37337-201ENSMUST00000192601 993 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm43652-201ENSMUST00000196219 675 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm9068-201ENSMUST00000217393 455 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm22154-201ENSMUST00000083844 131 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trafd1Q3UDK1 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms