Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm13901-201ENSMUST00000137252 468 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm27236-201ENSMUST00000184147 442 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Mir6385-201ENSMUST00000184295 105 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm27869-201ENSMUST00000184327 122 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm9696-202ENSMUST00000191541 830 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm37337-201ENSMUST00000192601 993 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm42621-201ENSMUST00000198114 275 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm10237-201ENSMUST00000078393 273 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm26228-201ENSMUST00000082512 107 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm25080-201ENSMUST00000082526 107 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm25518-201ENSMUST00000083864 107 ntBASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Brf2Q3UAW9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Brf2Q3UAW9 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.15□□□□□ -1.9
Brf2Q3UAW9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Brf2Q3UAW9 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Brf2Q3UAW9 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm2066-201ENSMUST00000118046 389 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm12053-201ENSMUST00000119022 252 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm13368-201ENSMUST00000122443 430 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm26275-201ENSMUST00000157101 268 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm22560-201ENSMUST00000157332 120 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm23124-201ENSMUST00000157650 107 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm23704-201ENSMUST00000158844 340 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Mir6413-201ENSMUST00000184049 108 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm27245-201ENSMUST00000184385 376 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm28343-201ENSMUST00000185386 112 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm18113-201ENSMUST00000220630 303 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm19563-201ENSMUST00000222031 270 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf2Q3UAW9 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm26147-201ENSMUST00000104479 114 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm12125-201ENSMUST00000117261 736 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm12386-201ENSMUST00000117380 688 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm11845-201ENSMUST00000117886 327 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm14020-201ENSMUST00000118165 662 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm12878-201ENSMUST00000118744 332 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm9119-201ENSMUST00000118866 495 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm9225-201ENSMUST00000121921 836 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm22611-201ENSMUST00000158288 150 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm6374-201ENSMUST00000159051 788 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Mir5127-201ENSMUST00000175295 71 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm8151-201ENSMUST00000184817 871 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm19637-201ENSMUST00000185933 579 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm29064-201ENSMUST00000187014 813 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.14□□□□□ -1.91
Brf2Q3UAW9 Gm37417-201ENSMUST00000195257 454 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms