Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm11456-201ENSMUST00000121070 256 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm25380-201ENSMUST00000175463 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm24641-201ENSMUST00000178055 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm25484-201ENSMUST00000178217 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm26138-201ENSMUST00000179236 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm22821-201ENSMUST00000179288 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm27460-201ENSMUST00000184213 100 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm29308-201ENSMUST00000188863 315 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm28537-201ENSMUST00000189026 315 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm29631-201ENSMUST00000191065 315 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm38015-201ENSMUST00000193048 188 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm29704-201ENSMUST00000196011 253 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm36259-201ENSMUST00000197340 392 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm23140-201ENSMUST00000082487 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm23298-201ENSMUST00000083181 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm24614-201ENSMUST00000083269 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm24454-201ENSMUST00000083349 132 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm26121-201ENSMUST00000083364 162 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm22057-201ENSMUST00000083387 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Mir20a-201ENSMUST00000083508 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm25895-201ENSMUST00000083714 100 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm25516-201ENSMUST00000083857 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm23947-201ENSMUST00000093636 107 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.28□□□□□ -1.56
Rnf40Q3U319 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf40Q3U319 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm43047-201ENSMUST00000200089 3460 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm15936-201ENSMUST00000118706 460 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm11196-201ENSMUST00000119052 395 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm25805-201ENSMUST00000122788 108 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm23260-201ENSMUST00000158317 172 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm26403-201ENSMUST00000158500 105 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm27960-201ENSMUST00000183445 184 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Mir7235-201ENSMUST00000183796 56 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Mir7653-201ENSMUST00000184358 61 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Mir7037-201ENSMUST00000184414 65 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm27818-201ENSMUST00000184536 159 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Mir6361-201ENSMUST00000185079 101 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm42988-201ENSMUST00000198116 225 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm43501-201ENSMUST00000202513 107 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm45420-201ENSMUST00000211243 425 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm7802-201ENSMUST00000216464 262 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm24966-201ENSMUST00000082443 79 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm22456-201ENSMUST00000082578 125 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf40Q3U319 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.27□□□□□ -1.57
Rnf40Q3U319 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm22371-201ENSMUST00000104588 130 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm5967-201ENSMUST00000172723 494 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm25069-201ENSMUST00000175238 86 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm27854-201ENSMUST00000175578 244 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Mir7220-201ENSMUST00000183978 60 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm5285-201ENSMUST00000193089 666 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm42666-201ENSMUST00000201954 152 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm45445-201ENSMUST00000209586 232 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 AC140254.1-201ENSMUST00000220063 331 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm7422-201ENSMUST00000220115 640 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm18617-201ENSMUST00000222311 259 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 AC154527.5-201ENSMUST00000224448 496 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.26□□□□□ -1.57
Rnf40Q3U319 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms